Pairwise Alignments

Query, 125 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., two component transcriptional regulator, winged helix family from Synechococcus elongatus PCC 7942

 Score = 80.9 bits (198), Expect = 1e-20
 Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 3/121 (2%)

Query: 5   NTMAKVLAVDDSISIRQMVSHTLQDAGYEVETAADGREALAKAQKARFDVIISDVNMPVM 64
           N   K+L VDD  SIR+++   L   GYEV TAADG EAL   + A  D+++ DV MP +
Sbjct: 3   NRKEKILVVDDEASIRRILETRLAMIGYEVVTAADGEEALITFRNATPDLVVLDVMMPKL 62

Query: 65  TGFEFVKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKPFNPETLLKTLQRV 124
            G+   + +R +S     PI+MLT       +  G  +GA  ++VKPF+P+ L   ++ V
Sbjct: 63  DGYGVCQELRKESD---VPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSV 119

Query: 125 L 125
           L
Sbjct: 120 L 120