Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., Signal transduction histidine kinase CheA (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  336 bits (862), Expect = 2e-96
 Identities = 233/765 (30%), Positives = 378/765 (49%), Gaps = 82/765 (10%)

Query: 6   EQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEISEF 65
           E++ + F VE  E LE L  +L++L+    D ++LN IFR  H++KGGAG   L+E+ E 
Sbjct: 7   EEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLNELVEC 66

Query: 66  THAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVGAELQA 125
            H  E   D++R  ++++ ++ +D +L++ D + +M     + + I  A  + + A L  
Sbjct: 67  CHIAENVFDILRKGERRVDSELMDVVLEALDAVNSMFSEVRERSPITAATPELLAA-LAR 125

Query: 126 LLADQGADRVMSQAQP--------------------VSSNTHTSNMHADAIAIPDATAQG 165
           L   Q AD     A+P                    +  + +T    A+A   P A A  
Sbjct: 126 LAEPQSADEAAPVAEPAVEEPVAEASGDITDNEFEQLLDSLNTVKAQAEAPVAPAAPAAP 185

Query: 166 WRIRFVPHETLFYSGNDPLRILRELRELGSEYQIELDHQALPELAEIDPELCYLSWTIRL 225
                   E         L  L    +   +  +     A P+ A               
Sbjct: 186 VADGVASDEITDAEFESLLDQLHGKGQFAPDAVVPPTAPAAPKAAGD------------- 232

Query: 226 TGDVSENDVRELFDWVEDECDLHIAPILSDEASAHVEDEQAAPAATLQSNPQTQVEPVAI 285
           + D+++++   L D +  +    +  +  D A A V       AAT  S+  +  E  ++
Sbjct: 233 SSDITDDEFEALLDQLHGKGTFAVDAL--DSAIASVPTPAKPAAATAGSDLISDHEFESL 290

Query: 286 VD--------------------LPAVEPPVATVAPVIANPKESATNKPAK---------- 315
           +D                      A   P A  AP  A        +PAK          
Sbjct: 291 LDELHGKGKFSEVGTASAAPAAAAAAAAPAAKAAPKPAAKAPEPKAEPAKPAAAAPAPAR 350

Query: 316 ----------TDSSVSSIRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDKLDKLKAG 365
                        + +++RVD  ++D ++N+VGELV+ ++ L  LG +   + + K  + 
Sbjct: 351 AAAAAPAEKPASEAETTVRVDTARLDEIMNMVGELVLVRNRLVRLGLNSQDEAMSKAVSN 410

Query: 366 LAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTELDKTV 425
           L  +   + DLQ  V+  RM P+   F RFPRLVRDL  +L K+++L++ GE+T+LDK +
Sbjct: 411 LDVV---TADLQTAVMKTRMQPIKKVFGRFPRLVRDLARQLKKEINLELVGEETDLDKNL 467

Query: 426 LERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDDGAGID 485
           +E + DPLVHLVRN +DHG+E P+ R A GK  +G + L A  +G  I++ ISDDG G+D
Sbjct: 468 VEALADPLVHLVRNAVDHGIESPEEREASGKVRSGKVILAAEQEGDHILLSISDDGKGMD 527

Query: 486 CDKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDVVRRNI 545
            + L   AV++GV++ +     L+D +  NLIFAPGFST  ++SD+SGRGVGMDVV+  I
Sbjct: 528 PNVLRSIAVKRGVMD-KDAADRLSDTECYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKI 586

Query: 546 EELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQINTASV 605
            +L G I + S  G+GS+  I +PLTLAI+   +V + +Q +  PL+ + E   ++  S 
Sbjct: 587 SQLNGSINIYSTKGQGSKIVIKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIFHLD-LSR 645

Query: 606 KHAAGGIELYRLREENIPILRLQDELAMGRSGSLEKRLICFVESAG-HRVGLLVDDLLDQ 664
            +   G E+  +R++ +P+  L+  L    +   +      + S G  R+G +VD L+ Q
Sbjct: 646 TNVVDGQEVVIVRDKALPLFYLKRWLVSSAAHVEQGEGHVVILSVGTQRIGFVVDQLVGQ 705

Query: 665 QQVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGLIAHFMKR 709
           ++VVIK L        G+SGATI GDG ++LILD+P ++  +  R
Sbjct: 706 EEVVIKPLGKMLQGTPGMSGATITGDGRIALILDVPSMLKRYAAR 750