Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., chemotaxis protein (sensory transduction histidine kinase) from Sinorhizobium meliloti 1021

 Score =  464 bits (1194), Expect = e-135
 Identities = 273/745 (36%), Positives = 421/745 (56%), Gaps = 47/745 (6%)

Query: 3   LDMEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEI 62
           +DM ++++IF  EC E L  LE  LL+L+    D E +N +FRA HSIKGGAG F L ++
Sbjct: 1   MDMNEIKEIFFQECEEQLAELESGLLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDL 60

Query: 63  SEFTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVGAE 122
             F H  ET LD +R+ + +     +  +L+S DV+ ++ ++      +DEA  +Q+  E
Sbjct: 61  VSFAHVFETTLDCVRSNRLEPNQDVLKVMLRSADVLADLTNAARDGGGVDEARSRQLIKE 120

Query: 123 LQALL--------ADQGADRVMSQAQPVSSNTHTSNMHADAIAI--------PDATAQGW 166
           L+AL         A+       +   P +   +       A +         P      +
Sbjct: 121 LEALANGELPQAAAESAPKTTPAGVAPAAPVVNEEGFQPVAFSFDDFETGDEPTIEPSTY 180

Query: 167 RIRFVPHETLFYSGNDPLRILRELRELGSEYQIELDHQALPELAEIDPELCYLSWTIRLT 226
            I F P   L+  GND   +LR+L  LG E  I  +   LP L  ++PE  Y SW I L 
Sbjct: 181 EIVFKPKSDLYSKGNDATLLLRDLSRLG-EMSIHCNMDTLPPLDRMNPEEAYFSWKISLK 239

Query: 227 GDVSENDVRELFDWVEDECDLHIA---------------------PILSDEASAHVEDEQ 265
            D  E  +R +F++ E +C+L +A                      IL DEA A   +E 
Sbjct: 240 TDKGEEAIRSVFEFAEWDCELDVALAGGTVGMDEDLPMQPVPFDLSILEDEAQAPAGEED 299

Query: 266 AAPAATLQSNPQTQVEPVAIVDLPAVEPPVATVAPVIANPKESATNKPAKTDSSVSS--- 322
            A A+   S            ++  +    A V+P  A   +SA+   A    + S+   
Sbjct: 300 RAAASEGDSRNAAVAAAQTASNVLQMAQSTARVSPENARNSQSASAAQAAAQQAASAATP 359

Query: 323 -IRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDKLDKLKAGLAQLLQNSKDLQENVL 381
            IRVD+++VD LINLVGELVI Q+ML++   +   +    +  GL +L Q ++++Q++V+
Sbjct: 360 TIRVDLDRVDRLINLVGELVINQAMLSQSVIENDTNGTSSINMGLEELQQLTREIQDSVM 419

Query: 382 NIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTELDKTVLERIVDPLVHLVRNGI 441
            IR  P+   F R  R+VR++    GK V L  +GE TE+DKTV++++ +PL H++RN +
Sbjct: 420 AIRAQPVKPVFQRMSRIVREIADMTGKSVRLITEGENTEVDKTVIDKLAEPLTHMIRNAV 479

Query: 442 DHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDDGAGIDCDKLWRKAVEKGVLEP 501
           DHG+E P+ R+A GK   G + L A H+ G I++E++DDGAGI+ +K+ +KA++  ++  
Sbjct: 480 DHGLETPEKRVAAGKNPEGTVRLTAKHRSGRIVIELADDGAGINREKVRQKAIDNDLIAA 539

Query: 502 QTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDVVRRNIEELGGQIEVDSELGRG 561
               ++L+D+++ NLIF  GFSTA+++SDISGRGVGMDVV+R+I+ LGG+I + S+ G+G
Sbjct: 540 D---ANLSDEEVDNLIFHAGFSTADKISDISGRGVGMDVVKRSIQALGGRINISSKPGQG 596

Query: 562 SRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQINTASVKHAAGGIELYRLREEN 621
           S FT+SLPLTLA+LDG +V VA+Q  V+PL  IVE++Q   +++        L  +R+  
Sbjct: 597 SIFTMSLPLTLAVLDGMVVTVANQTLVVPLTAIVETLQPEASAIHSFGSSQRLISIRDSF 656

Query: 622 IPILRLQDELAM-GRSGSLEKRLICFVES-AGHRVGLLVDDLLDQQQVVIKSLESNYAKV 679
            P++ +   L   G   +  + +   VES  G +  L+VD +  Q+QVVIKSLE+NY  V
Sbjct: 657 CPLVDVGRILNFRGAQANPVEGVALLVESEGGGQRALMVDAIQGQRQVVIKSLEANYTHV 716

Query: 680 AGISGATILGDGSVSLILDIPGLIA 704
            GI+ ATILGDG V+LILD+  ++A
Sbjct: 717 PGIAAATILGDGRVALILDVDAIVA 741