Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 708 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  161 bits (408), Expect = 9e-44
 Identities = 99/329 (30%), Positives = 167/329 (50%), Gaps = 10/329 (3%)

Query: 376 LQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTELDKTVLERIVDPLVH 435
           L E +   R  P + A     R+VRD+    GK+ +L+I G + E+D++++  + D L H
Sbjct: 246 LDEEIRLARTQPFAEACKGLGRIVRDVAAASGKRAELEISGGELEVDRSIVSALQDSLRH 305

Query: 436 LVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDDGAGIDCDKLWRKAVE 495
           LVRN + HG++ P+ R   G+PE G I + A  +G  + V + DDG G++   L      
Sbjct: 306 LVRNAVAHGIQTPEERRTAGRPEKGRILVSAAMRGNRMEVRVEDDGRGLNLALL------ 359

Query: 496 KGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDVVRRNIEELGGQIEVD 555
                 ++      +  I+  +F PG ST+  V+ +SGRG+G+D+V+RN+E+L G ++V 
Sbjct: 360 -SAATGESTHGKQAEADILRRVFEPGVSTSATVTSLSGRGIGLDIVKRNVEKLRGAVDVS 418

Query: 556 SELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQINTASVKHAAGGIELY 615
                G+ FT++LPLTLA +    V     V+ I   ++   I+I+         G    
Sbjct: 419 QVPTGGAAFTLTLPLTLATVRVLEVLAGGHVFTIDTTSVQRVIRIDRGDFT-LIEGRNFV 477

Query: 616 RLREENIPI--LRLQDELAMGRSGSLEKRLICFVESAGHRVGLLVDDLLDQQQVVIKSLE 673
           R     +P   + L   L   RS + E      V+S      +LVD++  +Q+++ +SL 
Sbjct: 478 RTPAGPMPFVDVSLWLRLQPNRSPASETTPAVVVDSPSGSTAVLVDEITGEQELLARSLG 537

Query: 674 SNYAKVAGISGATILGDGSVSLILDIPGL 702
              A V   S   +L DG ++L+L++  L
Sbjct: 538 PRLANVRRYSRGMVLPDGRIALLLNVAAL 566



 Score = 48.5 bits (114), Expect = 1e-09
 Identities = 52/207 (25%), Positives = 80/207 (38%), Gaps = 14/207 (6%)

Query: 8   LRKIFHVECRENLETLEGELLQLDPS---QVDLEVLNTIFRAAHSIKGGAGTFNLHEISE 64
           L  +F  E RE    +E  +L ++ S        +   + R AHS+KG AG   +  +  
Sbjct: 11  LLTMFTQEVRERASEMENAVLAIEASGDADRKRHLQEQLLRGAHSLKGAAGLLQVRGVET 70

Query: 65  FTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVGAELQ 124
             H +E  L +  N    L    +D LL + D IR+  +  E       A  Q V  +L+
Sbjct: 71  ICHWMEEILSMAANVGLVLERSRLDLLLSAADAIRDAANLLESGEIPSPAHGQDVVEKLK 130

Query: 125 ALLADQGADRVMSQAQPVSSNTHTSNMHADAIAIPDATAQG-WRIRFVPHETLFYSGNDP 183
           A +A  G+D  + +A       H   M    IAI      G  R+     + L Y   + 
Sbjct: 131 A-VATAGSDDGLKEAH------HHPPMAEPEIAIRATDTDGSMRVSAARLDALLYRSGEM 183

Query: 184 L---RILRELRELGSEYQIELDHQALP 207
           L    ++R   E  S  + E      P
Sbjct: 184 LTFNAVMRRHAEQASSLREEARKMRAP 210