Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., chemotaxis protein histidine kinase-like protein from Dechlorosoma suillum PS

 Score =  283 bits (723), Expect = 2e-80
 Identities = 180/475 (37%), Positives = 268/475 (56%), Gaps = 31/475 (6%)

Query: 250 APILSDEASAHVEDEQAAPAATLQSNPQTQVEPVAIVDLPAVEPPVATVAPVI------- 302
           AP  +  A +   D QA  AA     P     P A+V  PA    V   APV        
Sbjct: 146 APAAAPAAQSGEPDWQALHAAVTGVAPAA---PAAVV--PAAAEVVVAEAPVQPHFPPSG 200

Query: 303 --ANPKESATNKPA------KTDSSVSSIRVDIEKVDNLINLVGELVITQSMLTELGNDF 354
              N K  A   P       +     ++IRVD  ++D ++NL GE+ +T++ LT L  D 
Sbjct: 201 RRVNDKPGAGGAPVGRRVEERAAVRENTIRVDTARLDQVLNLSGEIGLTKNRLTSLRADI 260

Query: 355 SMDKLDK-----LKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKK 409
              K D      L   ++QL     DLQ +V+  RM P+   F ++PR+ RDL  +LGK 
Sbjct: 261 LAGKTDAETLHALDQAVSQLDLLVSDLQNSVMKTRMQPIGRLFQKYPRIARDLARQLGKD 320

Query: 410 VDLQIQGEQTELDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQ 469
           V+L + GE+TE+DKT++E + DPL+HL+RN +DHGVE  + R A GKP   V+ L+A  +
Sbjct: 321 VELVLAGEETEVDKTMIEDLADPLIHLIRNAVDHGVEPSNERSAAGKPVKSVVRLEARQE 380

Query: 470 GGSIIVEISDDGAGIDCDKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVS 529
           G  I++ ++DDG G+  +++  KA+EKG++  + + + L ++Q +NLIF PGFST  Q+S
Sbjct: 381 GDHIVLIVADDGRGMSAERIRAKAIEKGLIS-EEEANTLDERQSLNLIFLPGFSTKSQIS 439

Query: 530 DISGRGVGMDVVRRNIEELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVYVI 589
           D+SGRGVGMDVV+ NI++L G IE+ SE G+GS F ISLPLTLAIL   LV + DQ + +
Sbjct: 440 DVSGRGVGMDVVKTNIQKLNGAIEIRSEPGKGSVFIISLPLTLAILPVLLVLLGDQPFAL 499

Query: 590 PLLTIVESIQINTASVKHAAGGIELYRLREENIPILRLQDELAMGRSGSLEKRLICFVES 649
           PL  + E + I    ++   GG E   +R E +P++ L   L   +    E  ++  +++
Sbjct: 500 PLSMVREILPIEKDKLQE-VGGKETLVVRGEILPVISLARLLGWPQDRDPEYGVL--MQT 556

Query: 650 AGHRVGLLVDDLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGLIA 704
           A     L VD    +   VIKSL+    +  G++G T L +G + LILD+  L++
Sbjct: 557 AERSFILSVDSFAGRDDAVIKSLDD--FRPRGVAGVTTLSNGQIVLILDMKELLS 609



 Score = 62.4 bits (150), Expect = 7e-14
 Identities = 33/97 (34%), Positives = 54/97 (55%)

Query: 5   MEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEISE 64
           ME L + F  E  + L  ++ +L+ L+ +  D  +LN IFR  H+IKGGAG  N  E+  
Sbjct: 7   MEDLLQDFLQEANDLLSDVDNKLVDLEKAPDDRGLLNDIFRGFHTIKGGAGFLNATELVT 66

Query: 65  FTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNM 101
             H  E   D +RN + QL+ + +D ++ +   +R+M
Sbjct: 67  LCHLTENLFDRLRNGEMQLSPELMDIIMAATKGVRDM 103