Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 819 a.a., chemotaxis protein histidine kinase-like protein from Dechlorosoma suillum PS

 Score =  402 bits (1033), Expect = e-116
 Identities = 220/443 (49%), Positives = 297/443 (67%), Gaps = 19/443 (4%)

Query: 268 PAATLQSNPQTQVEPVAIVDLPAVEPP-VATVAPVIANPKESAT----NKPAKTDSSVSS 322
           PA    ++PQT          PAV P  VA  AP +  P   A      K     +  SS
Sbjct: 379 PAPAPLASPQTA---------PAVVPASVAAAAPALVAPAAEARVESRPKAPPVAAGDSS 429

Query: 323 IRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDKLDKLKAGLAQLLQNSKDLQENVLN 382
           IRV +EKVD LINLVGELVITQ+ML     +      ++L  GL QL +NS+DLQE V++
Sbjct: 430 IRVGVEKVDQLINLVGELVITQAMLLATAQEMQEAAPERLLNGLTQLERNSRDLQEAVMS 489

Query: 383 IRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTELDKTVLERIVDPLVHLVRNGID 442
           IRMLP+SF FSRFPR+VRDL G+LGK+V+L++ GE TELDK ++E+I DPL HL+RN +D
Sbjct: 490 IRMLPISFVFSRFPRVVRDLSGKLGKQVELKMSGETTELDKGLIEKITDPLTHLIRNSLD 549

Query: 443 HGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDDGAGIDCDKLWRKAVEKGVLEPQ 502
           HG+E P+ R+A GKP  G ITLKA HQGG+I++E+ DDGAG++  K+  KA EKG+    
Sbjct: 550 HGIESPEKRVAAGKPPGGTITLKAAHQGGNIVIEVGDDGAGLNRQKILAKAREKGL---- 605

Query: 503 TQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDVVRRNIEELGGQIEVDSELGRGS 562
                ++D+ +  LIF PGFSTA+QV+D+SGRGVGMDVVRRNI+ LGG+IE++S  G G+
Sbjct: 606 AASDQMSDQDVWALIFEPGFSTADQVTDVSGRGVGMDVVRRNIQALGGRIEIESMTGIGT 665

Query: 563 RFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQINTASVKHAAGGIELYRLREENI 622
           R T+ LPLTLAILDG  V V +++Y+IPL  +VES+Q   + +K  +    + ++R E +
Sbjct: 666 RMTVRLPLTLAILDGMSVAVGEEIYIIPLSYVVESLQPKPSDIKTVSNQGRVIQVRGEYL 725

Query: 623 PILRLQDELAM-GRSGSLEKRLICFVESAGHRVGLLVDDLLDQQQVVIKSLESNYAKVAG 681
           P++ L +  A   +     + ++  + + G +  L VD L+ Q QVVIKSLE NY KV G
Sbjct: 726 PVVVLHEVFAAEPKVREFHQGIMVVLNADGAKAALFVDGLVGQHQVVIKSLEQNYRKVQG 785

Query: 682 ISGATILGDGSVSLILDIPGLIA 704
           +SGATI+GDG V+LILD   L+A
Sbjct: 786 VSGATIMGDGRVALILDTSALVA 808



 Score =  107 bits (266), Expect = 3e-27
 Identities = 79/281 (28%), Positives = 133/281 (47%), Gaps = 43/281 (15%)

Query: 1   MALDMEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLH 60
           MA+DM Q  ++F  E  E+L  +E  LL LD    + E LN IFRAAHSIKG +GTF   
Sbjct: 1   MAIDMSQFYQVFFEESAEHLAEMESLLLGLDVGAPEDEDLNAIFRAAHSIKGSSGTFGFT 60

Query: 61  EISEFTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVG 120
           +++  TH +ET LD +R  +  L  + VD  L++ D+++ +L + +   A+    ++ + 
Sbjct: 61  DLTAVTHVLETLLDRLRKHEIGLRPEMVDAFLEAGDLLKLLLAAHQGGEAVSAEAQEAIC 120

Query: 121 AELQALLADQGADRVMSQAQPVSSNTHTSNMHADAIAIPDATAQ--------GWRIRFVP 172
            +L+ L  D+GA+ V                   A+ +P+A           GW I FVP
Sbjct: 121 EKLRQLSRDEGAEPV-------------------AVVMPEAVVAPADSGVDGGWEIEFVP 161

Query: 173 HETLFYSGNDPLRILRELRELGSEYQIELDHQALPELAEIDPELCYLSWTIRLTGDVSEN 232
                 S   P  +   L +LG + ++E+  ++   +  +        W +RL G V+  
Sbjct: 162 TPA---SLAVPETLENFLEDLGRQGRLEVLSRSSGPVPSL--------WQLRLYGQVARE 210

Query: 233 DVRELFDWVEDECDLHIAPI-----LSDEASAHVEDEQAAP 268
            + +  D+V +     ++P+      +DEA    +D   AP
Sbjct: 211 ALADSLDFVAETDAWRLSPLAAPAAAADEAFGLFDDAPGAP 251