Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 697 a.a., chemotaxis protein CheA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  343 bits (881), Expect = 1e-98
 Identities = 241/717 (33%), Positives = 380/717 (52%), Gaps = 50/717 (6%)

Query: 3   LDMEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEI 62
           +D   + ++F  E RE L  +E   L+L+ +  D  ++  +FR  H++KG    F   E 
Sbjct: 2   IDRPAVMRLFGDEARELLIDMESLFLELEQTPDDRALVARVFRTMHTLKGSGAMFGYTEA 61

Query: 63  SEFTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVGAE 122
           +   HA+E   D +R+ +  LT++ +   L++ D ++ +L+    +  +  A+++   A 
Sbjct: 62  ARVAHALEDVFDRVRHGRLPLTSELLGLCLEAKDHLQTLLEGDPADVPV--AVREASDAL 119

Query: 123 LQALLADQGADRVMSQAQPV-SSNTHTSNMHADAIAIPDATAQG----WRIRFVPHETLF 177
           +  + A +  +  +   Q V ++  + + +        DAT +     W +R  P +   
Sbjct: 120 MLRIAAFEHDEADVDDGQAVHAAKPYDTGVPEHMTISGDATGEAEVCLW-VRLTPADDWM 178

Query: 178 YSGNDPLRILRELRELGS-EYQIELDHQALPELAEIDPELCYLSWTIRLTGDVSENDVRE 236
           + G DPLR+L   R  G  E         L  + E+   +    W   LTG VS + +R+
Sbjct: 179 WRGLDPLRLLDSFRGYGPFEVVPVFADGGLEHVGEVPFPV---RWEGVLTGRVSADVLRQ 235

Query: 237 LFDWVEDECDLHI--------APILSDEASAHVEDEQAAPAATLQSNPQTQVEPVA-IVD 287
            + W+ D  +L I         P +    SA V      P A + +    + E +   +D
Sbjct: 236 DYAWLLDSENLSIMSLGKRSDCPPVRALLSAAVGGRVNDPLALMAAARAMEREDICNCMD 295

Query: 288 LPAVEPPVATVAPVIANPKESATNKPAKTDSSVSSIRVDIEKVDNLINLVGELVITQSML 347
           + +V   VA  A                 ++S SSIRV+  K+D L+  VGELVI QS L
Sbjct: 296 VQSVASEVAQAA-----------------EASSSSIRVESAKLDRLVGFVGELVILQSRL 338

Query: 348 TELGNDFSMDKLDKLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLG 407
           ++L      D + ++  GL +L   +  L+++ +++RM+PM   F  F RLVRDL  +LG
Sbjct: 339 SQLVRGVPDDAMREVAEGLERL---AGSLRDSAMSMRMVPMGSTFHSFRRLVRDLAAQLG 395

Query: 408 KKVDLQIQGEQTELDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAF 467
           KKV  + +G  TELDKT+++++ DPL+HL+RN +DHG+E P+VRLA GKPE GV+ L A 
Sbjct: 396 KKVLFEAEGGDTELDKTLIDQLRDPLLHLLRNAMDHGIEPPEVRLATGKPEEGVVRLGAS 455

Query: 468 HQGGSIIVEISDDGAGIDCDKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQ 527
           H GG + + +SDDGAG+D +K+  +AV  G++ P+T+    T   ++ L++ PGF+TA  
Sbjct: 456 HSGGEVHIYVSDDGAGVDLEKVRLRAVAMGLIPPETEPDTAT---LLALLYVPGFTTAPG 512

Query: 528 VSDISGRGVGMDVVRRNIEELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVY 587
           VS+ISGRGVGMDVV   I  L G +++++  GRG+   I LPLTLAI+DG  V V    Y
Sbjct: 513 VSEISGRGVGMDVVHSAIAALRGSLDMETTPGRGTTCHIRLPLTLAIIDGMRVLVGGDSY 572

Query: 588 VIPLLTIVESIQINTASVKHAAGGIELYRLREENIPILRLQDELAM-GRSGSLEKRLICF 646
           ++P LT+VE+       V  A   +E    R   IP + L+  L + G     E+ ++  
Sbjct: 573 IVP-LTMVEACL--ERFVDGAVRTVECIEYRGRLIPCVSLRLLLGVPGEQPGYERVIVAG 629

Query: 647 VESAGHRVGLLVDDLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGLI 703
            E  GH VG  VD ++  QQ VIK + +    VA ISG T+  DG +SLILD+  LI
Sbjct: 630 KE--GHEVGFAVDAVVGLQQAVIKGVGNLCRNVAWISGTTVDADGGISLILDVVQLI 684