Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 708 a.a., chemotaxis protein CheA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  462 bits (1188), Expect = e-134
 Identities = 289/726 (39%), Positives = 422/726 (58%), Gaps = 49/726 (6%)

Query: 1   MALDMEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLH 60
           M +  E  R+ F  E ++ L  LE  LL+++    D  +++ IFRA H+IKG    F   
Sbjct: 1   MIVQDELNRQAFVEEAQDLLAELETALLEIEERPEDRSLVDRIFRAMHTIKGSGAMFGFD 60

Query: 61  EISEFTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVG 120
           +I+ FTH VE+  D +RN + +L+ + +D  LKS D I  +L    +  A+D ++   + 
Sbjct: 61  DIASFTHDVESVFDKVRNGEMELSPELLDLTLKSRDHIAYLLQCATKGLAVDVSMSADLT 120

Query: 121 AELQALL-ADQGADRVMSQAQPVSSNTHTSNMHADAIAIPDATAQGWRIRFVPHETLFYS 179
             L+ALL  D  A    +   P S                +   + +R+RF PH  LF S
Sbjct: 121 QALRALLPGDDHASASPADEMPSSGEV-------------EGPRRTYRVRFKPHPQLFLS 167

Query: 180 GNDPLRILRELRELGSEYQIELDHQALPELAEIDPELCYLSWTIRLTGDVSENDVRELFD 239
           G +PL ++RE+++LG   ++ +    +P L E+DPE C++ W + LT D  E  +R++F 
Sbjct: 168 GTNPLGLVREIQDLGRS-KLFVHFGDVPALDELDPEQCHVWWDVLLTTDSDEAAIRDIFL 226

Query: 240 WVEDECDLHIAPILSDEASAHVED-----------EQAAPAATLQSNPQTQVEPVAIVDL 288
           +VED+  + +   L DEA+   +D           E+   A         +  P+  +  
Sbjct: 227 FVEDDATVDVR--LIDEANLLEQDGAYKRLGEILLERGDVATEDLRRVLEEQRPIGELLA 284

Query: 289 PAVEPPVATVAPVIANPK------ESAT---NKPA-KTDSSVSSIRVDIEKVDNLINLVG 338
            A       VA  +A  K       S T   +KPA K   + +SIRV   K+D L++LVG
Sbjct: 285 EAGIVTPDQVASALAEQKTVRELRRSRTEDGDKPAEKAGDAGASIRVSAAKLDYLVDLVG 344

Query: 339 ELVITQSMLTELGNDFSMDKLDKLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRL 398
           ELVI QS +  + ++     +  L   L +L   S DL++  L +RMLP+   FSRF RL
Sbjct: 345 ELVIVQSQIARMAHEHPAPGMLSLVEALERL---SDDLRDTTLGVRMLPIGTTFSRFRRL 401

Query: 399 VRDLCGRLGKKVDLQIQGEQTELDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPE 458
           VRDL G LGK V+L   G +TELDKTV+ER+ DPLVH +RN +DHGVE P+ RLA GK  
Sbjct: 402 VRDLAGELGKSVELVTLGGETELDKTVIERLGDPLVHCLRNSLDHGVESPERRLAAGKSA 461

Query: 459 TGVITLKAFHQGGSIIVEISDDGAGIDCDKLWRKAVEKGVLEPQTQRSDLTDKQIINLIF 518
           TG ITL A H GG ++V ISDDGAGID +++++ A+ KG++ P+    DL+ +Q + LIF
Sbjct: 462 TGRITLAAAHAGGEVLVTISDDGAGIDAERIYQAALRKGIIAPEV---DLSTRQKLELIF 518

Query: 519 APGFSTAEQVSDISGRGVGMDVVRRNIEELGGQIEVDSELGRGSRFTISLPLTLAILDGQ 578
           A GFSTAE+V+ +SGRGVGMDVV+R IE L G+IE++S  G+G+  TI LPLTLAI+DG 
Sbjct: 519 AAGFSTAEKVTSVSGRGVGMDVVKRAIESLRGRIELESTPGKGTVITIRLPLTLAIIDGL 578

Query: 579 LVKVADQVYVIPLLTIVESIQINTASVKHAAGGIELYRLREENIPILRLQDELAM-GRSG 637
            V+V D+ Y+IPL  + E  + NT    H  G   +  LR + +P +RL+D   + G S 
Sbjct: 579 QVRVGDESYIIPLPHVEECAEHNTPD--HVDGRQRIINLRGDIVPFIRLRDVFRVPGVSP 636

Query: 638 SLEKRLICFVESAGHRVGLLVDDLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLIL 697
            +E+ ++  V + G R GL+VD ++ + Q VIKSL   Y  + GISGATI GDGS++LI+
Sbjct: 637 GMEQLVV--VNALGSRFGLVVDCVIGEHQTVIKSLGKVYKDIPGISGATIQGDGSMALII 694

Query: 698 DIPGLI 703
           D+PGL+
Sbjct: 695 DVPGLV 700