Pairwise Alignments

Query, 175 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 178 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 75.1 bits (183), Expect = 6e-19
 Identities = 41/153 (26%), Positives = 82/153 (53%), Gaps = 6/153 (3%)

Query: 20  MDMGLTGGA----DFLSFMLGTELYGVTLSHVEEIRVWEKPTPIPRAPHFVKGVINLRGM 75
           +++G+T        +L+F    + + + +  V+EI   E  T +P  P F+ G+INLRG 
Sbjct: 5   VNVGMTNSVGDITQYLTFQSANDTFAIGILDVKEIIEIEGITRVPMMPEFLCGIINLRGK 64

Query: 76  IVPIIDLRQRFGLTQYEYLPTTVVLILSAREQEQKRLMGLVVDSVSDVIGQGDMPLHPA- 134
           +VP+IDL +R G         + ++++    +++++ +G++VD V++++   D    P  
Sbjct: 65  VVPVIDLSKRLGRLTTVISKKSCIVLVEVSHEDERQTIGMLVDEVNEILEIDDEHTQPPP 124

Query: 135 -IGESMVVPFLSGILNVGDEVMSLLDSDALLDM 166
             G  + V F+  +  VG+  M LLD + +L +
Sbjct: 125 DFGADLRVDFIRAMGRVGEHFMILLDINYVLSV 157