Pairwise Alignments

Query, 175 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 170 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  100 bits (248), Expect = 2e-26
 Identities = 57/141 (40%), Positives = 88/141 (62%), Gaps = 6/141 (4%)

Query: 29  DFLSFMLGTELYGVTLSHVEEIRVWEKPTPIPRAPHFVKGVINLRGMIVPIIDLRQRFGL 88
           +FLSF+LG E Y + +  V+EIR +E  T I  AP F+KGV+NLRG IVPI+DLR +F +
Sbjct: 20  EFLSFVLGEEHYALDIMSVKEIRGYEPVTKIANAPSFIKGVLNLRGDIVPIVDLRMKFNV 79

Query: 89  TQYEYLPTTVVLILSAREQEQKRLMGLVVDSVSDVIGQGDMPLHPA--IGESMVVPFLSG 146
               Y   T+V++L+  +    R++G+VVD+VSDVI      + PA   G +    +L G
Sbjct: 80  GTVTYDEFTIVIMLNVCD----RIVGIVVDAVSDVIKLSSEAILPAPEFGAAFDSRYLKG 135

Query: 147 ILNVGDEVMSLLDSDALLDMD 167
           +  V ++++ L++  AL+  D
Sbjct: 136 LATVDEKMVILVNIQALISSD 156