Pairwise Alignments

Query, 153 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 179 a.a., biotin synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  131 bits (330), Expect = 5e-36
 Identities = 56/138 (40%), Positives = 101/138 (73%), Gaps = 3/138 (2%)

Query: 4   REFLSFVLDDEEYGIPILEVREVRGWSPVRILPNAPPFVIGLLDIRGEYIPIVDLKRRLG 63
           +++LSF++ +EEYG+ IL V+E+RGW P  +LPNAP +V G++++RG  +PI+DL+++ G
Sbjct: 14  QQYLSFIMANEEYGVDILSVQEIRGWEPTTVLPNAPDYVKGVINLRGTIVPIIDLRQKFG 73

Query: 64  LVPVEINATTVVVVINAA---NQQPLGLIVDAVAEVYALSEQEIKHAPSISTVIGNQYVK 120
           +  +E  ATTVV+V+       Q+ +G++VDAV++V+++ E+EI+ AP        +++K
Sbjct: 74  IKTLEYGATTVVIVVKVTMDETQKVIGIVVDAVSDVFSIEEEEIRQAPDFGHGTDLRFIK 133

Query: 121 GIAAVKSKHLVLIDIDAL 138
           G+A V+ K ++L++I+ L
Sbjct: 134 GLANVQDKMVILLEINRL 151



 Score = 26.9 bits (58), Expect = 2e-04
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 78  INAANQQPLGLIV-DAVAEVYALSEQEIKHAPSISTVIGN--QYVKGIAAVKSKHLVLID 134
           +   NQQ L  I+ +    V  LS QEI+     +TV+ N   YVKG+  ++   + +ID
Sbjct: 9   VKQGNQQYLSFIMANEEYGVDILSVQEIRGWEP-TTVLPNAPDYVKGVINLRGTIVPIID 67

Query: 135 IDALFDVEALRLSTT 149
           +   F ++ L    T
Sbjct: 68  LRQKFGIKTLEYGAT 82