Pairwise Alignments

Query, 153 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score = 53.9 bits (128), Expect = 2e-12
 Identities = 34/137 (24%), Positives = 70/137 (51%), Gaps = 4/137 (2%)

Query: 5   EFLSFVLDDEE-YGIPILEVREVRGWSPVRILPNAPPFVIGLLDIRGEYIPIVDLKRRLG 63
           E L F L+  + +GI + +V+EV    P+  LP   P+V G+  IRG+ I ++DL    G
Sbjct: 21  ELLLFKLNGRQRFGINVFKVKEVLQCPPLTGLPKLNPYVRGVAHIRGQTISVIDLSAATG 80

Query: 64  LVPVEINATTVVVVINAANQQPLGLIVDAVAEVYALSEQEIKHAPSISTVIGNQYVKGIA 123
             P+E +     ++I+  N+   G +V +V  +  ++ + I   P  +      Y+  + 
Sbjct: 81  GRPIE-DTEGCFIIISEYNRSVQGFLVKSVERIINMNWEAIMPPPQGAG--RYSYLTAVT 137

Query: 124 AVKSKHLVLIDIDALFD 140
            ++ + + ++D++ + D
Sbjct: 138 EIEGELVEILDVEKILD 154