Pairwise Alignments

Query, 153 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 185 a.a., CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  125 bits (313), Expect = 5e-34
 Identities = 53/143 (37%), Positives = 96/143 (67%), Gaps = 3/143 (2%)

Query: 5   EFLSFVLDDEEYGIPILEVREVRGWSPVRILPNAPPFVIGLLDIRGEYIPIVDLKRRLGL 64
           ++L+F++ DEEYG+ IL V+E+RGW P  ++PN+P  V G++++RG  +PI+DL++R G+
Sbjct: 20  QYLTFIMADEEYGVDILSVQEIRGWEPTTVIPNSPSHVKGVINLRGTIVPIIDLRQRFGI 79

Query: 65  VPVEINATTVVVVINAA---NQQPLGLIVDAVAEVYALSEQEIKHAPSISTVIGNQYVKG 121
             ++   TTVV+VI        + +G++VDAV++V+++  ++++ AP         ++KG
Sbjct: 80  ASLDYGPTTVVIVIKVCVGDEHKVIGIVVDAVSDVFSVHHRDLRDAPDFGEETDLTFIKG 139

Query: 122 IAAVKSKHLVLIDIDALFDVEAL 144
           +A +  K ++L+DID L   E L
Sbjct: 140 LANLADKMVILLDIDTLLSSEVL 162