Pairwise Alignments

Query, 153 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.0 bits (123), Expect = 8e-12
 Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 4/137 (2%)

Query: 5   EFLSFVLDDEE-YGIPILEVREVRGWSPVRILPNAPPFVIGLLDIRGEYIPIVDLKRRLG 63
           E L F L+  + +GI + +V+EV    P+  LP   P+V G+  IRG  I ++DL    G
Sbjct: 21  ELLLFKLNGRQRFGINVFKVKEVLQCPPLTTLPKLNPYVKGVAHIRGTTISVIDLSAATG 80

Query: 64  LVPVEINATTVVVVINAANQQPLGLIVDAVAEVYALSEQEIKHAPSISTVIGNQYVKGIA 123
             P+  +     ++I+  N+   G +V +V  +  ++ + I   P  +      Y+  + 
Sbjct: 81  GRPL-ASTENCFIIISEYNRSVQGFLVSSVERIINMNWEAIMPPPQGAG--RYSYLTAVT 137

Query: 124 AVKSKHLVLIDIDALFD 140
            ++ + + ++D++ + D
Sbjct: 138 EIEGELVEILDVEKILD 154