Pairwise Alignments

Query, 153 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 164 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  103 bits (258), Expect = 1e-27
 Identities = 47/138 (34%), Positives = 94/138 (68%), Gaps = 1/138 (0%)

Query: 5   EFLSFVLDDEEYGIPILEVREVRGWSPVRILPNAPPFVIGLLDIRGEYIPIVDLKRRLGL 64
           ++++F LD+E YGI +++V+EV  ++ +  +P AP +V+G++++RG  + ++D + R GL
Sbjct: 20  QWVTFKLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIINLRGNVVTVIDTRSRFGL 79

Query: 65  VPVEINATTVVVVINAANQQPLGLIVDAVAEVYALSEQEIKHAPSISTVIGNQYVKGIAA 124
              E++ +T +V+I  A +Q +G++VD+VAEV  L   EI +AP++ T    ++++G++ 
Sbjct: 80  QSAEVDDSTRIVIIE-AEKQVIGILVDSVAEVVYLRRSEIDNAPNVGTEESAKFIQGVSN 138

Query: 125 VKSKHLVLIDIDALFDVE 142
             ++ L+L+D+D L   E
Sbjct: 139 RDNELLILVDLDKLLSDE 156