Pairwise Alignments

Query, 153 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.8 bits (125), Expect = 5e-12
 Identities = 30/124 (24%), Positives = 69/124 (55%), Gaps = 3/124 (2%)

Query: 16  YGIPILEVREVRGWSPVRILPNAPPFVIGLLDIRGEYIPIVDLKRRLGLVPV-EINATTV 74
           + +  L++RE+  ++P+  +P + P ++G   IRG  IP+VD+   +G  PV +      
Sbjct: 22  FALGTLKIRELVPYTPLSKIPQSHPTILGAATIRGHTIPVVDMAAAIGYRPVSDEERQHC 81

Query: 75  VVVINAANQQPLGLIVDAVAEVYALSEQEIKHAPSISTVIGNQYVKGIAAVKSKHLVLID 134
            ++I    +  +G +V A+ ++   + ++I+ APS + +  N ++ G+    ++ + L+D
Sbjct: 82  YIIITDCQRMIIGFLVRAIDKIIECNWRDIE-APS-ANLGKNAFLTGVTRYDNQLVQLLD 139

Query: 135 IDAL 138
           ++ L
Sbjct: 140 VELL 143