Pairwise Alignments

Query, 153 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.1 bits (126), Expect = 4e-12
 Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 8/137 (5%)

Query: 5   EFLSFVLDDEE-YGIPILEVREVRGWSPVRILPNAPPFVIGLLDIRGEYIPIVDLKRRLG 63
           E L F ++  + + I + +V+EV    P+  +P + P + G+ +IRG  IP++DL+  +G
Sbjct: 21  ELLLFRINSMQLFAINVFKVKEVVKLPPLNAMPGSHPHISGVANIRGMSIPVIDLRSAIG 80

Query: 64  LVPVEINATTVVVVINAANQQPLGLIVDAVAEVYALSEQEIKHAPSISTVIGNQYVKGIA 123
             PV  +  T  ++I   N+   G +V  V  +  ++  +I   P   T   N Y+  I 
Sbjct: 81  FKPVPPD-DTANMIITEYNRSVQGFLVGKVEHIINMTWSDIMPPP--KTAGRNNYLTAIT 137

Query: 124 AV----KSKHLVLIDID 136
            +    +S+ + +ID++
Sbjct: 138 RIDYQGQSQLVSIIDVE 154