Pairwise Alignments

Query, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 600 a.a., methyl-accepting chemotaxis protein from Ralstonia sp. UNC404CL21Col

 Score =  300 bits (769), Expect = 1e-85
 Identities = 156/274 (56%), Positives = 215/274 (78%)

Query: 345 GDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSARVATASTEIADGNNDLSQR 404
           GDL   +  + + E  ++A + N     L  ++ +I + S  V +A+ EIA GN DLSQR
Sbjct: 316 GDLTKRLPSDGEDEVAQIARSFNTFADKLTAVMQQIRLGSDSVRSAAQEIAAGNADLSQR 375

Query: 405 VEAQASNLEETAASMEEITATVRQNADNAKDANLLATDAAKKAARGGEVVGEAISAMGAI 464
            E QAS+LEETA+SMEE+T+ V+QNADNA+ A+ LA  A+  A RGG+VVG+ +  MG I
Sbjct: 376 TEEQASSLEETASSMEELTSIVKQNADNARQASQLAVTASDVATRGGDVVGQVVQTMGGI 435

Query: 465 NTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAGAA 524
           N +SKKIADII VI+ IAFQTN+LALNAAVEAARAGEQGRGFAVVA EVR+LAQRSAGAA
Sbjct: 436 NESSKKIADIIGVIESIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAGAA 495

Query: 525 KEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLIAQIAASSVEQSTGIDEIN 584
           KEIK LI+DSVD+V+ G+ LV+++G T+ EIV+AV RV+D++ +I+++S EQS+GI+++N
Sbjct: 496 KEIKALISDSVDRVSNGTALVDQAGVTMAEIVDAVKRVTDIMGEISSASEEQSSGIEQVN 555

Query: 585 RAIAAMDEMTQQNASLVEETSAASQSLKDEGKEL 618
           +A+  MD++TQQNA+LVE+ +AA++SL+++   L
Sbjct: 556 QAVNQMDQVTQQNAALVEQAAAAAESLEEQAHNL 589



 Score = 33.5 bits (75), Expect = 3e-05
 Identities = 39/195 (20%), Positives = 74/195 (37%), Gaps = 31/195 (15%)

Query: 320 GINNLLNTLVEPLGQCITVMSRVAEGDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDK 379
           GIN     + + +G   ++  +     LN ++     GE GR  + V + + +L      
Sbjct: 434 GINESSKKIADIIGVIESIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSL------ 487

Query: 380 ITVSSARVATASTEIADGNNDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLL 439
               + R A A+ EI    +D   RV    + +++   +M EI   V++  D        
Sbjct: 488 ----AQRSAGAAKEIKALISDSVDRVSNGTALVDQAGVTMAEIVDAVKRVTD-------- 535

Query: 440 ATDAAKKAARGGEVVGEAISAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARA 499
                        ++GE  SA    ++  +++   ++ +D++  Q   L   AA  A   
Sbjct: 536 -------------IMGEISSASEEQSSGIEQVNQAVNQMDQVTQQNAALVEQAAAAAESL 582

Query: 500 GEQGRGFAVVAGEVR 514
            EQ        G+ R
Sbjct: 583 EEQAHNLNEAVGQFR 597