Pairwise Alignments

Query, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 657 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  467 bits (1202), Expect = e-136
 Identities = 269/653 (41%), Positives = 390/653 (59%), Gaps = 6/653 (0%)

Query: 27  DESETQSGLSNYQLLSALNAAQTALMMIDRDFRITYFNNQTLKLLKQHETLFRSVWPDFR 86
           +E+  Q      +    L+ +  + M+ D +  I Y N   L +L + E   R   P F 
Sbjct: 10  EEARQQKEEELQRYFQLLDNSGNSFMIADSNRNIIYANKAVLNMLSEAEADIRKELPQFS 69

Query: 87  AEADFLHGYCIDHFHLNPRHQRTMLADPSHLPYTTVINIKGVKIELIVGAIIDDRGSYIG 146
                + G  ID FH NP HQR ML   +   +T  I I     +LI+  II     ++G
Sbjct: 70  VAK--VVGSNIDIFHKNPAHQRNMLERLTQ-SHTAQITIGKRTFKLILTPIITRENKHLG 126

Query: 147 NTLEWRDVTEELLRDQQIGRLASAVEGMTTNLMMADKEGIIQYLNPALLQLLTHREPELA 206
             +EW D TE +  ++   R+  A+   +TN+M+AD    I Y+N ++  +L   E E+ 
Sbjct: 127 TGVEWIDRTESIESERATQRILEALNNTSTNVMIADANRTIIYMNRSVESMLRQSESEIR 186

Query: 207 QAFPGFKAAELVGKNIDIFHKNPAHQRSIISNPERLPFTSMIKVGSLEFNLTCIAMRDTK 266
           QA P F   +++G ++DIFHKNPAHQ S++   +R  + S IKV S  F LT   +    
Sbjct: 187 QALPHFSVDKILGSSMDIFHKNPAHQASLLDKLDR-KYESQIKVASCHFRLTASPIISKT 245

Query: 267 GEYIGPALQWVDITEQRDGQRQVESLIQKAIKGDLHDRINTSGYNGFMRELGDGINNLLN 326
           GE +G  ++W+D T +   ++++  ++  A  GD   R  T G  GF   L + +N L+ 
Sbjct: 246 GERLGSVVEWLDRTVEVQIEQEISRIVNAAAAGDFSQRAETQGKQGFFLMLANSLNALIE 305

Query: 327 TLVEPLGQCITVMSRVAEGDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSAR 386
           T    L     V+  +AEGDL T +  +Y+G F  L +  N +   L  M+  I  ++  
Sbjct: 306 TSDRGLQDVARVLMALAEGDLTTRIYNDYEGTFNDLKNYSNQTAEKLSYMIRDIQKAADT 365

Query: 387 VATASTEIADGNNDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATDAAKK 446
           + TAS+EIA GN DLS R E QAS+LE+T+ASMEE+T TV+ NADNA  AN LA+ AA  
Sbjct: 366 INTASSEIAQGNADLSSRTEEQASSLEQTSASMEELTGTVKLNADNASQANALASKAADV 425

Query: 447 AARGGEVVGEAISAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGF 506
           A  GGE++ + +  M +IN +++KIADII VID IAFQTN+LALNAAVEAARAGEQGRGF
Sbjct: 426 AVDGGELIQQVVQTMASINESARKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGF 485

Query: 507 AVVAGEVRNLAQRSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLI 566
           AVVA EVR+LAQRSA AAK+IK LI+DSV K+  G+ LV +SG T+KEIV A+ RV+D++
Sbjct: 486 AVVASEVRSLAQRSANAAKDIKALISDSVTKIESGNSLVGKSGDTMKEIVIAIKRVNDIM 545

Query: 567 AQIAASSVEQSTGIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELL-NLMNFF 625
           A+IA++S EQ+ GIDEI++A+  MDEMTQQNA+LVEE +AA++S++ + ++L  ++ NF 
Sbjct: 546 AEIASASNEQAIGIDEISKAVVQMDEMTQQNAALVEEAAAAAESMQSQAQQLADSVANFT 605

Query: 626 VTENNVTTFERKPRQSTPPKTKPVVSMHKAPINQAVHKMPARAAEEGDEWEEF 678
           V E+     +           +P  ++ + P+           A++ DEWE+F
Sbjct: 606 VDEDTSAAPKSVASTKKLAVKQPPSTVTRMPVKPKAMAPKVNKADQ-DEWEDF 657