Pairwise Alignments

Query, 233 a.a., chemoreceptor glutamine deamidase CheD from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., Chemotaxis protein CheD from Pseudomonas fluorescens FW300-N2E2

 Score = 70.5 bits (171), Expect = 2e-17
 Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 15/164 (9%)

Query: 50  VKVMPGGVYATSDQEIIHTGLGSCVSACAWDIEMKVGGMNHFLLPFNNQFESQHWHPQAL 109
           V + PG     +    + T LGSCV+   W  E K+GGM HF+LP      S+    +AL
Sbjct: 4   VYLAPGEFRFATCPTRLRTILGSCVAITLWHPERKIGGMCHFMLP------SRVRCSKAL 57

Query: 110 LSDSSRYGCYAMEVLINRLLSMGAERERLKFKLFGGAHLMGYQSL------VGEKNVEFV 163
              +  Y   A+E+ I +  +   E E  + KLFGG  +            V   NV   
Sbjct: 58  ---NGLYADEAIELFIRQARAHHTEPEDYQLKLFGGGEMFPELQRHVPYGDVARLNVNAA 114

Query: 164 LEYAKREKLNVVAQDLGGAQPRKLLFDPQTGQAWVKRIGFSSAH 207
           LE A   +L+++AQD+G    R ++FD  +G  WV+     + H
Sbjct: 115 LEIAALYRLDLIAQDMGSTGHRSIIFDLCSGDVWVRHQPIRTRH 158