Pairwise Alignments

Query, 233 a.a., chemoreceptor glutamine deamidase CheD from Vibrio cholerae E7946 ATCC 55056

Subject, 215 a.a., chemotaxis protein from Dechlorosoma suillum PS

 Score =  139 bits (349), Expect = 6e-38
 Identities = 80/196 (40%), Positives = 114/196 (58%), Gaps = 10/196 (5%)

Query: 39  RFNHPSDHRHWVKVMPGGVYATSDQEIIHTGLGSCVSACAWDIEMKVGGMNHFLLPFNNQ 98
           R+   S  R   K++PG  Y   D  ++ T LGSCV+AC  D +  +GGMNHF+LP    
Sbjct: 27  RYFDRSFERPAAKILPGEYYVARDDMLLVTVLGSCVAACIRDGDSGIGGMNHFMLPEAGG 86

Query: 99  FESQHWHPQALLSDSSRYGCYAMEVLINRLLSMGAERERLKFKLFGGAHLMGY--QSLVG 156
                   + ++S S+RYG YAMEVLIN LL +GA R RL+ K+FGG  ++     + VG
Sbjct: 87  --------EGMVSTSARYGTYAMEVLINHLLKLGARRGRLEAKVFGGGAVLSSLASAQVG 138

Query: 157 EKNVEFVLEYAKREKLNVVAQDLGGAQPRKLLFDPQTGQAWVKRIGFSSAHAIKQDEELY 216
            +N EFVL + K EK+ VVA+DL  + PRK+ + PQTG+  VK++       +   E+ Y
Sbjct: 139 ARNAEFVLNFLKTEKIPVVAKDLLDSYPRKVYYFPQTGKVLVKKLHRVHNDTLFTREKEY 198

Query: 217 QHSIDKQIPSDDVELF 232
           Q  + +     D+ELF
Sbjct: 199 QSRLGQAKVEGDIELF 214