Pairwise Alignments

Query, 233 a.a., chemoreceptor glutamine deamidase CheD from Vibrio cholerae E7946 ATCC 55056

Subject, 154 a.a., chemotaxis protein CheD from Methanococcus maripaludis S2

 Score = 74.7 bits (182), Expect = 9e-19
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 12/153 (7%)

Query: 50  VKVMPGGVYATSDQEIIHTGLGSCVSACAWDIEMKVGGMNHFLLPFNNQFESQHWHPQAL 109
           +KV  G +      E I T LGSCV+   +D   K+GG+ H +LP +     +       
Sbjct: 3   LKVKMGDIGVAKSPESIETLLGSCVAIILYDRGKKIGGVAHVMLPKSRNSSEK------- 55

Query: 110 LSDSSRYGCYAMEVLINRLLSMGAERERLKFKLFGGAHLMGYQSL---VGEKNVEFVLEY 166
             +  +Y   A+  LINR+  +GA +++L  KL GGA +    S    VG+KN+E   E 
Sbjct: 56  --NPGKYANTAIPELINRMAKLGARKDKLTTKLAGGAAMFKCNSNTIDVGKKNIEASREE 113

Query: 167 AKREKLNVVAQDLGGAQPRKLLFDPQTGQAWVK 199
            K+  L + ++DLGG   R +    + G   V+
Sbjct: 114 VKKMGLRIASEDLGGDTGRTITLSLKDGSVLVR 146