Pairwise Alignments

Query, 233 a.a., chemoreceptor glutamine deamidase CheD from Vibrio cholerae E7946 ATCC 55056

Subject, 154 a.a., chemotaxis protein CheD from Methanococcus maripaludis JJ

 Score = 73.9 bits (180), Expect = 2e-18
 Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 12/153 (7%)

Query: 50  VKVMPGGVYATSDQEIIHTGLGSCVSACAWDIEMKVGGMNHFLLPFNNQFESQHWHPQAL 109
           +KV  G +    + E I T LGSCV+   +D   K+GG+ H +LP +     +       
Sbjct: 3   LKVKMGDIGVAKNPESIETLLGSCVAIILYDRGKKIGGVAHVMLPKSRNSSEK------- 55

Query: 110 LSDSSRYGCYAMEVLINRLLSMGAERERLKFKLFGGAHLMGYQSL---VGEKNVEFVLEY 166
             +  +Y   A+  LINR+  +GA +++L  KL GGA +    S    VG+KN+E   + 
Sbjct: 56  --NPGKYANTAIPELINRMAKLGARKDKLTTKLAGGAAMFKCNSNTIDVGKKNIEASRQE 113

Query: 167 AKREKLNVVAQDLGGAQPRKLLFDPQTGQAWVK 199
            K+  L + ++DLGG   R +    + G   V+
Sbjct: 114 VKKMGLRIASEDLGGYTGRTITLSLKDGSVLVR 146