Pairwise Alignments

Query, 233 a.a., chemoreceptor glutamine deamidase CheD from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., chemotaxis protein CheD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  140 bits (353), Expect = 2e-38
 Identities = 83/204 (40%), Positives = 126/204 (61%), Gaps = 16/204 (7%)

Query: 38  YRFNHPSDH--RHW----VKVMPGGVYATSDQEIIHTGLGSCVSACAWDIEMKVGGMNHF 91
           +  N P+ +  RH+    VK++PG  +AT +  +I T LGSCV+ C +D  +K+GGMNHF
Sbjct: 10  FALNEPNRYYDRHFERSAVKILPGEYFATRENTMIVTVLGSCVAVCLYDPVLKIGGMNHF 69

Query: 92  LLPFNNQFESQHWHPQALLSDSSRYGCYAMEVLINRLLSMGAERERLKFKLFGGAHLMGY 151
           LLP +N           ++++S+RYG +AME+LIN +L +GA R  L+ K+FGG +++  
Sbjct: 70  LLPNDNVTAPN------MMTESARYGVFAMELLINHVLKLGARRNALEAKVFGGGNVLRG 123

Query: 152 QSL--VGEKNVEFVLEYAKREKLNVVAQDLGGAQPRKLLFDPQTGQAWVKRIGFSSAHAI 209
            ++  +GE+N EFVL+Y + E++ V+A DL    PRK+ F P+TG   V++I       I
Sbjct: 124 LTVQNIGERNAEFVLDYLQMEQIPVIAADLLDIYPRKVYFFPETGLVKVRKIKTIHNSTI 183

Query: 210 KQDEELYQHSIDKQIPS-DDVELF 232
              E  Y+  I K +PS  DVELF
Sbjct: 184 MDRESEYRLRI-KNLPSGGDVELF 206