Pairwise Alignments

Query, 233 a.a., chemoreceptor glutamine deamidase CheD from Vibrio cholerae E7946 ATCC 55056

Subject, 199 a.a., chemotaxis protein CheD, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 44/147 (29%), Positives = 62/147 (42%), Gaps = 23/147 (15%)

Query: 65  IIHTGLGSCVSACAWDIEMKVGGMNHFLLPFNNQFESQHWHPQALLSDSSRYGCYAMEVL 124
           +I T LGSCVS        + GG+ H +LP                +D +R  C  ++  
Sbjct: 44  LIATVLGSCVSVTFHHPSTETGGIFHAMLP-----------TVLGAADGARTPCKYVDAA 92

Query: 125 INRLLSMGAER----ERLKFKLFGGAHLMGYQSL--------VGEKNVEFVLEYAKREKL 172
           I  LL   A R      L  KLFGGA  M  +          VG +NVE      +R  +
Sbjct: 93  IETLLGQFARRGIAANDLVVKLFGGAFTMNPEEKQRLRCIVDVGGRNVEVARATLQRFGI 152

Query: 173 NVVAQDLGGAQPRKLLFDPQTGQAWVK 199
              ++ + G + RKL F   TG+ WV+
Sbjct: 153 EPQSEHILGDRGRKLFFHSGTGEVWVR 179