Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 685 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score = 82.8 bits (203), Expect = 3e-20
 Identities = 79/266 (29%), Positives = 121/266 (45%), Gaps = 45/266 (16%)

Query: 90  LEKQRLIINSSAETLNNSFFGLQRVSE--EQSSVSTQLVDNLMANQGSEFDLMQVLPKTE 147
           +E Q++ I+  A          Q V++  EQ+S S Q    +  +   +        +T 
Sbjct: 434 VEAQQMQISQIAAAATQLAATSQGVAKSCEQASDSAQQTRRIATDSSHDSQ------RTT 487

Query: 148 AIIQQFVQILVDVSEKSISAVHSIHDMSQKLDMVFKLLNQVRSLSEQTNLLALNAAIEAA 207
           A IQQ  Q L     ++ +A+  + +  Q++ +V   ++ +R ++EQTNLLALNAAIEAA
Sbjct: 488 ASIQQLNQRL----NETAAALGRVSEQGQQIQLV---VDTIRGVAEQTNLLALNAAIEAA 540

Query: 208 RAGEAGRGFAVVAQEVRNLSIQAANLNTQIETEMKVAQDTVDIANRTVGEMASF------ 261
           RAGE GRGFAVVA EVR+LS +  +   QI         TVD    TV E  S       
Sbjct: 541 RAGEQGRGFAVVADEVRSLSQRTQSSTQQIAA-------TVDSLRATVNEAVSLMEAACG 593

Query: 262 ----DMTQAIESKEKVDYMLRGVQ-------QLNTEIEQEVNKLQRLG------QQLTQQ 304
               D        E++  +   VQ       Q+ T ++++ +    +        Q   +
Sbjct: 594 QAQTDAQAVTGLGERLGEIASAVQSVTDTLAQIATAVDEQASTADEVSGNIQQVDQAAMR 653

Query: 305 VREGTRALQFTDIVYQQGEYALGSIT 330
           + EG RA+        QG  AL + T
Sbjct: 654 LLEGARAVNLAADTLSQGSRALSANT 679