Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score = 89.0 bits (219), Expect = 3e-22
 Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 17/284 (5%)

Query: 62  VRLSAEQQQALSLLEQVLKENIQRVAEPLEKQRLIINSSAETLNNSFFGLQRVSEEQSSV 121
           VR   +    L+ L   + E  QR  + +E+QR   +  A  +N      Q V+      
Sbjct: 281 VRQITDMTSQLTGLVTQVSEQAQRSEQAMERQRHETDQVATAINEMSSAAQEVARSAQGA 340

Query: 122 STQLVDNLMANQGSEFDLMQVLPKTEAIIQQFVQILVDVSEKSISAVHSIHDMSQKLDMV 181
           +       +A Q ++ +           IQQ   ++ D+    +S    +  + Q +  +
Sbjct: 341 A-------VAAQQTDEEGQSAKRVVAGSIQQIHALVNDIRSSGVS----LDSLQQDVASI 389

Query: 182 FKLLNQVRSLSEQTNLLALNAAIEAARAGEAGRGFAVVAQEVRNLSIQAANLNTQIETEM 241
             +L  +RS++EQTNLLALNAAIEAARAGEAGRGFAVVA EVR L+ +      +I+  +
Sbjct: 390 VSVLGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTQEIQGMI 449

Query: 242 KVAQDTVDIA------NRTVGEMASFDMTQAIESKEKVDYMLRGVQQLNTEIEQEVNKLQ 295
              Q     A      +   G+  S    +A  S + +  ++  +  +N +I     +  
Sbjct: 450 DRLQSGTHAAVEAMRRSSEAGDGTSERANEAGASLDTMAQLIGTINSMNAQIASAAEEQT 509

Query: 296 RLGQQLTQQVREGTRALQFTDIVYQQGEYALGSITFLQEASGLL 339
            + +++ + V +   A+       Q G     S+  L +  G L
Sbjct: 510 AVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLADLGQRLGKL 553