Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score = 84.3 bits (207), Expect = 8e-21
 Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 31/199 (15%)

Query: 149 IIQQFVQILVDVSEKSISAVHSIHDMSQKLDMVFKLLNQVRSLSEQTNLLALNAAIEAAR 208
           ++++ +Q + ++S+K   +   I  ++   D +  +L+ ++ +S+QTNLLALNAAIEAAR
Sbjct: 424 VVEKTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNAAIEAAR 483

Query: 209 AGEAGRGFAVVAQEVRNL----------------SIQAANLN--TQIETEMKVAQDTVDI 250
           AGEAGRGFAVVA EVRNL                S+Q  +    T +      ++++V++
Sbjct: 484 AGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQTSSEESVEV 543

Query: 251 ANRT----------VGEMASFDMTQAIESKEK---VDYMLRGVQQLNTEIEQEVNKLQRL 297
           AN+           +GE+   + + A  ++E+   V+ +   V  +N   +Q V  L   
Sbjct: 544 ANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQTAVVETLNMDVSHINLLNQQSVANLNET 603

Query: 298 GQQLTQQVREGTRALQFTD 316
            +      ++  R  Q  D
Sbjct: 604 LKDCDALSQQANRLKQLVD 622



 Score = 31.2 bits (69), Expect = 8e-05
 Identities = 52/307 (16%), Positives = 113/307 (36%), Gaps = 34/307 (11%)

Query: 54  VTAQPTDD--VRLSAEQQQALSLLEQVLKENIQRVAEPLEKQRLIINSSAETLNNSFFGL 111
           VT  P  +  + LS ++ +A + L Q     +  +   +    L+++   + L      +
Sbjct: 245 VTGLPNAEWYIGLSIDKAKAYAPLSQFRTSALIAMFVAVAAIALLLSLLIQVLMRPLTTM 304

Query: 112 QRVSEEQSSVSTQLVDNLMANQGSEFDLMQVLPKTEAIIQQFVQ-ILVDVSEKSISAVHS 170
            R  ++ +     L   L+     EF ++           QFV+ I   +SE S SA   
Sbjct: 305 GRAMQDIAQGEGDLTRRLVVQGKDEFAVLG------GSFNQFVERIHASISEVS-SATRQ 357

Query: 171 IHDMSQKLDMVFKLLNQVRSLSEQTNLLALNAAIEAARAGEAGRGFAVVAQEVRNLSIQA 230
           +HD+SQ+             +   +N   + +  ++AR          +    + ++  A
Sbjct: 358 VHDLSQR-------------VMTSSNASLVGSDEQSARTNSVAAAINQLGAATQEIARNA 404

Query: 231 ANLNTQIETEMKVAQDTVDIANRTVGEMASFDMTQAIESKEKVDYMLRGVQQLNTEIEQE 290
           A+ +       + A D   +  +T+  M         E  +K+      ++ LN   +  
Sbjct: 405 ADASQHASGASEQADDGRQVVEKTIQAMT--------ELSQKISLSCTQIETLNASTD-N 455

Query: 291 VNKLQRLGQQLTQQVREGTRALQFTDIVYQQGEYALGSITFLQEASGLLKAVQSNSRNVQ 350
           +  +  + + ++QQ      AL       + GE   G      E   L    Q ++  + 
Sbjct: 456 IGHILDVIKGISQQT--NLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIH 513

Query: 351 QLIENIE 357
           ++I +++
Sbjct: 514 KMITSLQ 520