Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N1B4

 Score = 81.6 bits (200), Expect = 5e-20
 Identities = 82/342 (23%), Positives = 148/342 (43%), Gaps = 60/342 (17%)

Query: 9   TAILIGQILLLLVIFQFGQIWWLGLIAICIGLL--PWLAGGAPQPSIVTAQPTDDVRLSA 66
           T+ +I  I+ +++I        + L+++ I +L  P L  G     I   +     RL+ 
Sbjct: 273 TSAIIAMIIAVVII--------IALLSMLIRVLMQPLLTMGRAMHDIAEGEGDLTKRLTI 324

Query: 67  EQQQALSLLEQVLKENIQRVAEPLEKQRLIINSSAETL-------NNSFFGLQRVSEEQS 119
             Q     L       ++R+   + +         E         N+S F   + +   S
Sbjct: 325 HGQDEFGALGTSFNRFVERIHTSIREVSSATGQVNEVALRVVAASNSSMFNSDQQASRTS 384

Query: 120 SVST----------QLVDNLMANQGSEFDLMQVLPKTEAIIQQFVQILVDVSEKSISAVH 169
           SV+           ++  N         D   +    + ++ + +  +  +S K   +  
Sbjct: 385 SVAAAINELGAAAQEIAQNAALASQHSSDARALAEDGQQVVDKTIAAMQQLSAKISDSCG 444

Query: 170 SIHDMSQKLDMVFKLLNQVRSLSEQTNLLALNAAIEAARAGEAGRGFAVVAQEVRNLSIQ 229
           +I  ++     + ++L  + S+S+QTNLLALNAAIEAARAGEAGRGFAVVA EVRNL+ +
Sbjct: 445 NIETLNSNTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHR 504

Query: 230 AANLNTQIE---TEMKV---------------AQDTVDIANRT----------VGEMASF 261
             +   Q++    E++V               ++ +V IAN+           +GE+   
Sbjct: 505 TQDSAQQVQKMIEELQVGAREAVSTMTDSQRQSESSVGIANQAGERLGSVTQRIGEIDGM 564

Query: 262 DMTQAIESKEKVDYMLRGVQQLNTEIEQEVNKLQRLGQQLTQ 303
           + + A  ++E+       V+ +N +I  E+N L + G +  Q
Sbjct: 565 NQSVATATEEQTAV----VESINVDI-TEINTLNQEGVENLQ 601