Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 6/169 (3%)

Query: 147 EAIIQQFVQILVDVSEKSISAVHSIHDMSQKLDMVFKLLNQVRSLSEQTNLLALNAAIEA 206
           EA+++  +  + DVS +  S    I  +      + K+L  +R +++QTNLLALNAAIEA
Sbjct: 336 EAVMRATIATITDVSGEIASTAEVIRRLEGDSGRIGKVLEVIRGIADQTNLLALNAAIEA 395

Query: 207 ARAGEAGRGFAVVAQEVRNLSIQAANLNTQIETEMKVAQDTVDIANRTV------GEMAS 260
           ARAG+AGRGFAVVA EVR L+ + A    +I   +   Q     A R +       E   
Sbjct: 396 ARAGDAGRGFAVVADEVRTLAQRTAESTAEIHQIIDTVQTGASNAVRAIESGQARSEQGV 455

Query: 261 FDMTQAIESKEKVDYMLRGVQQLNTEIEQEVNKLQRLGQQLTQQVREGT 309
             +T+A    +++   +  ++ +N +I     +   + + +++ + E T
Sbjct: 456 GQVTEAGLMLQRITEAVEAIRDMNRQIATAAEEQTAVAEDISRNITEIT 504