Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score = 84.7 bits (208), Expect = 7e-21
 Identities = 62/272 (22%), Positives = 134/272 (49%), Gaps = 11/272 (4%)

Query: 45  AGGAPQPSIVTAQPTDDVRLSAEQQQALSLLEQV--LKENIQRVAEPLEKQRLIINSSAE 102
           +G   Q   VT      V     Q+   +L E +  +++++ ++A   E+   +   ++ 
Sbjct: 329 SGDLTQTLAVTRSDELGVLQQGIQRMGTTLRELIGGIRDSVVQIASAAEELSAVTEQTSA 388

Query: 103 TLNNSFFGLQRVS---EEQSSVSTQLVDNLMANQGSEFDLMQVLPKTEAIIQQFVQILVD 159
            +N+      +V+    E S+   ++  N      +  +  +     + ++ + +  +  
Sbjct: 389 GVNSQKVETDQVATAMHEMSATVAEVARNAEQASQAASNADREARDGDKVVGEAIAQIER 448

Query: 160 VSEKSISAVHSIHDMSQKLDMVFKLLNQVRSLSEQTNLLALNAAIEAARAGEAGRGFAVV 219
           ++ +   +V ++ ++ Q+ D + K+++ +++++EQTNLLALNAAIEAARAGEAGRGFAVV
Sbjct: 449 LANEVGRSVDAMTELEQESDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVV 508

Query: 220 AQEVRNLSIQAANLNTQIETEMKVAQ------DTVDIANRTVGEMASFDMTQAIESKEKV 273
           A EVR L+ +      +IET +   Q       ++ + +R +   +     QA  S   +
Sbjct: 509 ADEVRGLAQRTQQSTVEIETLVAALQSGTRQVSSIMLNSRELTVSSVTLSRQAGTSLGSI 568

Query: 274 DYMLRGVQQLNTEIEQEVNKLQRLGQQLTQQV 305
              +  +Q +N +I     +   + +++++ +
Sbjct: 569 TQTVSSIQAMNQQIAAAAEEQSAVAEEISRSI 600