Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score = 87.8 bits (216), Expect = 7e-22
 Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 24/253 (9%)

Query: 79  LKENIQRVAEPLEKQRLIINSSAETLNNSFFGLQRVSEEQSSVSTQLVDNLMANQGSEFD 138
           L +++Q +    E   L +      +  +   + ++S+    V+    + +  ++ S   
Sbjct: 290 LSQSVQEMGSIAEASALNLQLQNTEIEQAAVAVNQMSQAAIEVAGNASNTVTESEASTRA 349

Query: 139 LMQVLPKTEAIIQQFVQILVDVSEKSISAVHSIHDMSQKLDMVFKLLNQVRSLSEQTNLL 198
             Q   K  A I     +  +V + S    H    ++++   +  +L+ +R+++ QTNLL
Sbjct: 350 AAQGQEKLSATILSIKALTENVLDSS----HQAEGLAERTQSISSILDVIRAIANQTNLL 405

Query: 199 ALNAAIEAARAGEAGRGFAVVAQEVRNLSIQAANLNTQIETEMK-VAQDTVDIAN--RTV 255
           ALNAAIEAARAGEAGRGFAVVA EVR+L+ + +    +IE  +  V Q T   A+  R  
Sbjct: 406 ALNAAIEAARAGEAGRGFAVVADEVRSLAQRTSASTAEIEGLISGVQQSTQQTASSLRHT 465

Query: 256 GEMASFDMTQAIESKEKVDYMLRGVQQLN-----------------TEIEQEVNKLQRLG 298
              A+  M QA  + E +  +++    +N                 TE+++ ++ ++ L 
Sbjct: 466 ATQANLTMEQAASTGEALQVIIQSTATINDRNLLIASAAEQQAQVATEVDRNLSSIRDLS 525

Query: 299 QQLTQQVREGTRA 311
            Q     ++ T A
Sbjct: 526 SQTASGAQQTTVA 538