Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score = 90.9 bits (224), Expect = 1e-22
 Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 5/181 (2%)

Query: 166 SAVHSIHDMSQKLDMVFKLLNQVRSLSEQTNLLALNAAIEAARAGEAGRGFAVVAQEVRN 225
           SA  SIH MS+  + +  +L  ++ +++QTNLLALNAAIEAARAGE GRGFAVVA EVR+
Sbjct: 502 SASQSIHTMSENTNQIISVLGVIKEIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRS 561

Query: 226 LSIQAANLNTQIETEMKVAQDTVDIANRTVGEMASFDMTQAIESKEKVDYMLRGVQQLNT 285
           L+ +  +  TQIE  +   +   D A + + E  +    Q  ++  +V   L  V     
Sbjct: 562 LASRTQSCTTQIEQILTTLRRDADTAEQLMLETQN-SCQQVTQNTARVTSNLGAVTDSIA 620

Query: 286 EIEQEVNKLQRLGQQ---LTQQVREGTRALQ-FTDIVYQQGEYALGSITFLQEASGLLKA 341
           E+     ++    +Q   +T ++ +    ++     + Q G+  L S   L  A+  L A
Sbjct: 621 ELNDLGGQIASASEQQSVVTAEISQNMHTIEAMAQTLLQNGQQTLESTQSLSAANQQLSA 680

Query: 342 V 342
           +
Sbjct: 681 M 681