Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Shewanella loihica PV-4

 Score = 84.7 bits (208), Expect = 5e-21
 Identities = 64/188 (34%), Positives = 101/188 (53%), Gaps = 21/188 (11%)

Query: 148 AIIQQFVQILVDVSEKSISAVHS--------IHDMSQKLDMVFKLLNQVRSLSEQTNLLA 199
           A++Q + Q+  D    SI  +H+        + ++      + ++L  +  ++EQTNLLA
Sbjct: 307 AVLQGYEQL--DAVVASIDELHNEVGNFAQVVSEIEHDSVAINQVLEVITKIAEQTNLLA 364

Query: 200 LNAAIEAARAGEAGRGFAVVAQEVRNLSIQAANLNTQIETEM-KVAQDTVDIANR-TVGE 257
           LNAAIEAARAGE+GRGFAVVA EVR LS + A+  +QI+  + K  Q T + AN  T G+
Sbjct: 365 LNAAIEAARAGESGRGFAVVADEVRQLSARTADSTSQIDAIIAKFQQSTANAANTLTAGQ 424

Query: 258 MASFDMTQAIESKEKVDYMLRGVQQLNTEIEQEVNKLQRLGQQLTQQVREGTRALQFTDI 317
             +    Q ++  E V        +L T I+ ++N++  L     Q+  +G  A+  +D 
Sbjct: 425 RQATQAVQLVKQAEAV------FAELVTRID-KINQMTELSADAMQE--QGLAAVDISDS 475

Query: 318 VYQQGEYA 325
           +    E A
Sbjct: 476 LQAISELA 483