Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score = 85.9 bits (211), Expect = 3e-21
 Identities = 91/368 (24%), Positives = 161/368 (43%), Gaps = 60/368 (16%)

Query: 28  IWWLGLIAICIGLLPWLAGGAPQPSIVTAQPTDDV---------RLSAEQQQALSLLEQV 78
           +W + + A  IGL  +++    QP    A    D+         RL  E    L+ L + 
Sbjct: 289 VWTVLIAAAFIGLSTFVSASVSQPIAKVADMLQDIGQGEGDLRQRLPVEGNDELAQLAKG 348

Query: 79  LKENIQRVAEPL-----------EKQRLIINSSAETLNNS-------FFGLQRVSEEQSS 120
               I+++   +              + + N + +T ++S          +  ++E  ++
Sbjct: 349 FNSFIEKIQHSIIEVTDTSVQLSHAAKDVANQAQQTQDDSQLQKDQTMMVVTAINEMGAT 408

Query: 121 V------STQLVDNLMANQGSEFDLMQVLPKTEAIIQQFVQILVDVSEKSISAVHSIHDM 174
           V      + Q  DN      +  +   V+ +    I Q  Q +  V        + I  +
Sbjct: 409 VHEIAGNAAQAADNAKDADNASSNGQIVVTRARDTINQLSQDVEQVG-------NVIESL 461

Query: 175 SQKLDMVFKLLNQVRSLSEQTNLLALNAAIEAARAGEAGRGFAVVAQEVRNLSIQAANLN 234
           +     +  +L+ +R++S+QTNLLALNAAIEAARAGEAGRGFAVVA+EVRNL+ + A   
Sbjct: 462 ATHTTSIGSILDVIRAVSDQTNLLALNAAIEAARAGEAGRGFAVVAEEVRNLASRTAAST 521

Query: 235 TQIETEMKVAQDTVDIANRTVGEMASFDMTQAIESKEKVDYMLRGVQQLN---TEIEQEV 291
            +++   K+  +    A R V  M         +SK +    ++ V + +   TEI Q++
Sbjct: 522 DEVQ---KMIDNLQSEAARAVEAMT--------QSKSRSQEGVQAVDEASHTLTEISQQI 570

Query: 292 NKLQRLGQQLTQQVREGTRALQFTDIVYQQGEYALGSITFLQEASGLLKAVQSNSRNVQQ 351
             +  +  Q+     E +  ++  DI   +    +  IT  Q  S   +AV   S+++ Q
Sbjct: 571 GAITDMNIQVAAATEEQSTVVE--DI--NRNVTEISEIT--QRTSETSQAVAQASQSLNQ 624

Query: 352 LIENIEAL 359
           L   ++ L
Sbjct: 625 LAHRLDTL 632