Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 81.6 bits (200), Expect = 3e-20
 Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 32/205 (15%)

Query: 116 EEQSSVSTQLVDNLMA--NQGSEF-----------------------DLMQVLPKTEAII 150
           ++QS  +T L  +++A  NQG E                        +L ++  +T   I
Sbjct: 43  QQQSRQNTDLYSDVIACQNQGGEMLNAVRDGIASSAEILTEEKESLSELDKIFDQTRVAI 102

Query: 151 QQFVQILVDVSEKSISAVHSIHDMSQKLDMVFKLLNQVRSLSEQTNLLALNAAIEAARAG 210
                    +++++ S++ ++ +++     + + +  ++ +SEQTNLLALNAAIEAARAG
Sbjct: 103 VNLGNRATYINKQATSSMQAVTELNSTTSSINQFVAAIQGISEQTNLLALNAAIEAARAG 162

Query: 211 EAGRGFAVVAQEVRNLSIQAANLNTQIETEMKVAQDTVDIANRTVGEMASFDMTQAIE-- 268
           EAGRGFAVVA EVR L+ +A   ++QIE   K+ +  V  A+  + E+   +   A++  
Sbjct: 163 EAGRGFAVVADEVRQLASKAHEASSQIE---KLVKQIVTQAS-NIKEIVHNNQNSALDVA 218

Query: 269 -SKEKVDYMLRGVQQLNTEIEQEVN 292
            S  ++  ++  V Q +  ++Q ++
Sbjct: 219 SSSTQIGQVVEDVLQRSNNMQQVIH 243