Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  100 bits (249), Expect = 1e-25
 Identities = 76/281 (27%), Positives = 142/281 (50%), Gaps = 34/281 (12%)

Query: 67  EQQQALSLLEQVLKENIQRVAEPLEKQRLIINSSAETLNNSFFGLQRVSEEQS----SVS 122
           E ++A    E+   E + + A  LE    +++S++E L+       R +EEQ+      +
Sbjct: 283 EAEEARRQAERAKAEGMLQAAVKLEGVVEVLSSASEELSAQIEQSDRGAEEQARRVGETA 342

Query: 123 TQLVD------NLMANQGSEFDLMQ-VLPKTEA---IIQQFVQILVDVSEKSISAVHSIH 172
           T + +       +  N G   D+ +    K E+   I+ + V  + +V  +S++  H + 
Sbjct: 343 TAMEEMNATVLEVARNAGQAADIAENTRRKAESGAEIVGRVVTGISEVQSQSVALKHDME 402

Query: 173 DMSQKLDMVFKLLNQVRSLSEQTNLLALNAAIEAARAGEAGRGFAVVAQEVRNLSIQAAN 232
           D+ ++ + + +++N +  +++QTNLLALNAAIEAARAGEAGRGFAVVA EVR L+ +   
Sbjct: 403 DLGRQAEAIGQIMNVISDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMQ 462

Query: 233 LNTQIETEMKVAQ-------DTVDIANRTVGE------MASFDMTQAIESKEKVDYMLRG 279
             T++   ++  Q       D VD + +T+ E      ++   + + ++  + V   +RG
Sbjct: 463 ATTEVGNAIRGVQGGTRKNMDNVDRSVKTIEEATQAARLSGEALREIVKMVDTVSDQVRG 522

Query: 280 V-------QQLNTEIEQEVNKLQRLGQQLTQQVREGTRALQ 313
           +          + EI + V ++  +  +  Q +RE   A+Q
Sbjct: 523 IATASEQQSAASEEINKSVEQVSAISAETAQAMREAATAVQ 563



 Score = 26.2 bits (56), Expect = 0.003
 Identities = 22/117 (18%), Positives = 49/117 (41%)

Query: 111 LQRVSEEQSSVSTQLVDNLMANQGSEFDLMQVLPKTEAIIQQFVQILVDVSEKSISAVHS 170
           +++++E+    +T++ + +   QG     M  + ++   I++  Q      E     V  
Sbjct: 453 VRKLAEKTMQATTEVGNAIRGVQGGTRKNMDNVDRSVKTIEEATQAARLSGEALREIVKM 512

Query: 171 IHDMSQKLDMVFKLLNQVRSLSEQTNLLALNAAIEAARAGEAGRGFAVVAQEVRNLS 227
           +  +S ++  +     Q  + SE+ N      +  +A   +A R  A   QE+ N S
Sbjct: 513 VDTVSDQVRGIATASEQQSAASEEINKSVEQVSAISAETAQAMREAATAVQELANQS 569