Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score = 84.3 bits (207), Expect = 7e-21
 Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 9/209 (4%)

Query: 145 KTEAIIQQFVQILVDVSEKSISAVHSIHDMSQKLDMVFKLLNQVRSLSEQTNLLALNAAI 204
           K++  ++Q    +V +  K  +A H+I +M++    +  +L+ +  +++QTNLLALNAAI
Sbjct: 321 KSKKAVEQAANTVVALVGKVDTAAHTIAEMNENTRHIATILDVIGDIADQTNLLALNAAI 380

Query: 205 EAARAGEAGRGFAVVAQEVRNLSIQ----AANLNTQIETEMKVAQDTVDIANRTVG--EM 258
           EAARAGE GRGFAVVA EVR L+ +     A +N  +E     A   V+  + T    + 
Sbjct: 381 EAARAGEQGRGFAVVADEVRALAARTQASTAEINQMLERLRTGANSAVNAMDETKQSCQD 440

Query: 259 ASFDMTQAIESKEKVDYMLRGVQQLNTEIEQEVNKLQRLGQQLTQQVREGTRALQFTDIV 318
           A+   T   ES E +   +  +  L+ +I     +   + +++ + +       +  + +
Sbjct: 441 AADTTTLVTESLETLTTYVFDINGLSNQIATAAEEQSAVSEEINRNL---NTIREMVEEL 497

Query: 319 YQQGEYALGSITFLQEASGLLKAVQSNSR 347
            Q G+  L S T L      L  V S+ R
Sbjct: 498 NQSGKATLNSATSLAATKEQLTGVVSHFR 526