Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 79/266 (29%), Positives = 121/266 (45%), Gaps = 21/266 (7%)

Query: 70  QALSLLEQVLKENIQRVAEPLEKQRLIINSSAETLNNSFFGLQRVSEEQSSVSTQLVDNL 129
           Q LSL      +  +   E +  Q   ++S A  +      ++ VS   S+ S Q  DN 
Sbjct: 213 QTLSLAADEFNQQAKSSGELIGAQHQFLDSVAVAMAQMTSAIEEVSVNASNTSLQTKDN- 271

Query: 130 MANQGSEFDLMQVLPKTEAIIQQFVQILVDVSEKSISAVHSIHDMSQKLDMVFKLLNQVR 189
            A+Q S          ++  I   V  +  +S K  +A  S+  +S+    +  ++  + 
Sbjct: 272 -ASQMSA---------SQGRISHTVDSIGQLSTKIGAAFSSVEQLSKDAAGIDAVVTTIN 321

Query: 190 SLSEQTNLLALNAAIEAARAGEAGRGFAVVAQEVRNLSIQAANLNTQIETEMKVAQDTVD 249
           S+SEQTNLLALNAAIEAARAGE GRGFAVVA EVR L    A    Q   E++   + + 
Sbjct: 322 SISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL----AGRTQQATVEIQAMIEGLQ 377

Query: 250 IANRTVGEMASFDMTQAIESKEKVDYMLRGVQQLNTEIEQEVNKLQRLGQQLTQQVREGT 309
              R +  + +  + +A E +  +  +   V+ +     Q VN +  +  Q+     E +
Sbjct: 378 SGTRQLSNITTEIVDRADEGRSAIIAVGDDVEGM----AQSVNAVFDMSSQIAASAEEQS 433

Query: 310 RALQFTDIVYQQGEYALGSITFLQEA 335
            A +  DI  Q  E    S T  Q A
Sbjct: 434 VAAR--DIAGQLNEIRHQSDTIKQTA 457