Pairwise Alignments

Query, 568 a.a., two-component system sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., response regulator containing a CheY-like receiver domain and an HD-GYP domain from Dechlorosoma suillum PS

 Score =  135 bits (340), Expect = 3e-36
 Identities = 106/382 (27%), Positives = 185/382 (48%), Gaps = 23/382 (6%)

Query: 3   VMIVDDHGTNRELCRFILAHIASHIDTFEDGQQAIDAMREMEILPDVILLDVMMPIKDGF 62
           ++IVDD   N E+    L      +    +G +A+ A    E  PD+ILLDVMMP  DG+
Sbjct: 28  ILIVDDARENVEVLADCL-QFEYDLRFAYNGPEAL-ACAVDEPPPDLILLDVMMPGMDGY 85

Query: 63  VTAKEIRQAFVKHHIPIIFLTVLDDRDSFEKCLALGD-DFILKPVERSVLIAKVQAHYRI 121
                ++       IP++F+T +       + LALG  DFI +PV  S++ A+V++H  +
Sbjct: 86  EVLDRLKSDPATAAIPVVFVTAMTAIRDEVRGLALGAVDFIGRPVSPSIVRARVRSHVAL 145

Query: 122 VKMHNEVMEQRDELRHFREQVQYDYAISESIFTNLMEEM---CHQVEHIFGIHYISTPST 178
            +   ++ EQ   L H R        ++E I T L E     CH+      + Y+ +   
Sbjct: 146 AEARRQLAEQNQWLMHER-------CLAEDILTRLRETETFDCHK------LRYVLSSVD 192

Query: 179 IFNGDLIVVANRPHGGVYVMIADATGHGLPAAISTIPATRTFFSTAQKGLSLGEMVIELN 238
             NGD+++ A  P    +V++ D +GHG  +A+        F+S A +      ++IELN
Sbjct: 193 RSNGDMLLSAMTPDRRQWVLVGDISGHGPASAVVAPLLGHVFYSQAAENGDAEALLIELN 252

Query: 239 HSLERFLPVGMMLAASVFEVRANGFEISWWGGGLPEAYLLDHHGNIVSRLISNHMPLGVL 298
             + + LP+ M +A ++ EV A    +  W GG+P  +     G + + + S + PLG+ 
Sbjct: 253 RVMFQRLPLQMFMAFALVEVNAARDRLRVWNGGMPGCFNRSGRGKL-TLVGSTYYPLGLQ 311

Query: 299 PS-NEFEADVQHFKLEPNQKLVCYTDGIIEAMNEQGEYFGQERLEHVLTKAYSEALIPTL 357
           P+  E EA  +     P  +   +TDG  E  +E G+ FG+E +  +L +      +  +
Sbjct: 312 PNLGETEAPTE-LVFHPRDRFYLFTDGFCECEDENGKAFGEEAIFALLAEPGPRRSVQGI 370

Query: 358 YDAVKKFSNRGK-GDDLSILTM 378
           + A  ++    +  DDL+++ +
Sbjct: 371 WLAAARYHGSDQFRDDLTLVEL 392