Pairwise Alignments

Query, 568 a.a., two-component system sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 65.5 bits (158), Expect = 8e-15
 Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 4/116 (3%)

Query: 2   RVMIVDDHGTNRELCRFILAHIASHIDTFEDGQQAIDAMREMEILPDVILLDVMMPIKDG 61
           R+++VDD   NRE+    LA     +    +G +A+      +  PD IL+D  M   DG
Sbjct: 606 RILLVDDTEANREVLAEYLAQAHCQVRQAANGLEAVTLAESWQ--PDAILMDCQMAGMDG 663

Query: 62  FVTAKEIR-QAFVKHHIPIIFLTVLDDRDSFEKCLALG-DDFILKPVERSVLIAKV 115
           +   ++IR Q   +   PII LT    R   EKCLA G DD++ KPV+   LIA +
Sbjct: 664 YEATRQIRIQEGQRRRTPIIALTAFVMRGDREKCLAAGMDDYLPKPVDAQTLIATI 719



 Score = 47.4 bits (111), Expect = 2e-09
 Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 3/112 (2%)

Query: 2   RVMIVDDHGTNRELCRFILAHIASHIDTFEDGQQAIDAMREMEILPDVILLDVMMPIKDG 61
           R+++VDD+   RE    +L  +   + +   G++A+    E +   D++L+D  MP  DG
Sbjct: 739 RILLVDDNPEIREASTCLLEALGCQVQSASSGEEALQLGPEADF--DLVLMDCRMPGLDG 796

Query: 62  FVTAKEIRQAFVKHHIPIIFLTVLDDRDSFEKCLALG-DDFILKPVERSVLI 112
             T +  R         II LT  D  +S  +C   G +DF+ KP     L+
Sbjct: 797 CATTRAWRARERGTPTAIIALTAGDPDESRAQCREAGMNDFLAKPFSEQELV 848