Pairwise Alignments

Query, 568 a.a., two-component system sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  143 bits (360), Expect = 2e-38
 Identities = 82/253 (32%), Positives = 129/253 (50%), Gaps = 4/253 (1%)

Query: 127 EVMEQRDELRHFREQVQYDYAISESIFTNLMEEMCHQVEHIFGIHYISTPSTIFNGDLIV 186
           ++ME    L+ + +Q + +  ++  +    M     Q  H+   HY  + +  F+GD++ 
Sbjct: 261 KLMENAAALQQYYDQAEEENQLAARLLDKQMLRPGLQDSHV---HYWLSAAKNFSGDVVA 317

Query: 187 VANRPHGGVYVMIADATGHGLPAAISTIPATRTFFSTAQKGLSLGEMVIELNHSLERFLP 246
               P G +  ++ADATGHGL AAIST+P    F+  A +GL L  MV E+N  L+  LP
Sbjct: 318 ATRTPDGSLVALLADATGHGLTAAISTLPLLTVFYGMANRGLPLESMVGEMNRHLKASLP 377

Query: 247 VGMMLAASVFEVRANGFEISWWGGGLPEAYLLDHHGNIVSRLISNHMPLGVLPSNEFEAD 306
            G  +AA+V  +         W GG+PE+ LLD  G +V    S H+P G+L ++EFEA 
Sbjct: 378 TGHFVAANVVLLDPATGTGQAWCGGMPESLLLDGDGEVVRTFASRHLPFGILGTDEFEAS 437

Query: 307 VQHFKLEPNQKLVCYTDGIIEAMNEQGEYFGQERLEHVLTKAYSEALIPTLYDAV-KKFS 365
           +  F   P  +L+ Y+DG  EA  + G   G   L  +L     E  +  L  A+ +  +
Sbjct: 438 IDTFPCTPGHQLMLYSDGFKEAEGKNGAQLGHAGLREILRGVPPEQRLTALQQALAEHLA 497

Query: 366 NRGKGDDLSILTM 378
                DD+S+L +
Sbjct: 498 GSPAQDDISVLLL 510



 Score = 88.6 bits (218), Expect = 5e-22
 Identities = 46/143 (32%), Positives = 84/143 (58%), Gaps = 3/143 (2%)

Query: 1   MRVMIVDDHGTNRELCRFILAHIASHIDTFEDGQQAIDAMREMEILPDVILLDVMMPIKD 60
           +R+++ DD  + R++   +L      +   EDGQQA+D     +  PD++LLD+MMP+ D
Sbjct: 8   LRILVADDSPSIRQILLALLGRQGHQVIAAEDGQQALDLFHRHQ--PDLLLLDIMMPVLD 65

Query: 61  GFVTAKEIRQAFVKHHIPIIFLTVLDDRDSFEKCL-ALGDDFILKPVERSVLIAKVQAHY 119
           G   A+ IR   +   +PIIFL+ LD R++    L A GDDF+ KP++ ++L A++++ +
Sbjct: 66  GMEVARRIRAEKLDRWVPIIFLSALDRRENLVAGLEAGGDDFLAKPLDFALLDARIRSMH 125

Query: 120 RIVKMHNEVMEQRDELRHFREQV 142
           + + +  +  E   +L+   + V
Sbjct: 126 KALDLQRQARESYRQLKAISDNV 148