Pairwise Alignments

Query, 568 a.a., two-component system sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 11/131 (8%)

Query: 3   VMIVDDHGTNRELCRFILAHIASHIDTFEDGQQAIDAMREMEILPDVILLDVMMPIKDGF 62
           V++VDD   N ++   +L+   S I     G +A+ A+  +E +PD+ILLDVMMP  DGF
Sbjct: 10  VLVVDDSADNIQILHGLLSDKYS-IRAATSGAKAL-ALAAIEPMPDLILLDVMMPEMDGF 67

Query: 63  VTAKEIRQAFVKHHIPIIFLT----VLDDRDSFEKCLALGD-DFILKPVERSVLIAKVQA 117
            T   ++   +  HIPIIF+T    ++D+R  FE    LG  D+I KPV+ ++L A+V+ 
Sbjct: 68  QTCIRLKHNPLTRHIPIIFVTAKTDIVDERTGFE----LGAVDYISKPVKPAILEARVKT 123

Query: 118 HYRIVKMHNEV 128
           H  +    N++
Sbjct: 124 HLTLASRANQL 134