Pairwise Alignments

Query, 568 a.a., two-component system sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., response regulator receiver protein (RefSeq) from Shewanella sp. ANA-3

 Score =  182 bits (463), Expect = 2e-50
 Identities = 144/570 (25%), Positives = 272/570 (47%), Gaps = 35/570 (6%)

Query: 3   VMIVDDHGTNRELCRFILAHIASHIDTFEDGQQAIDAMREMEILPDVILLDVMMPIKDGF 62
           ++I DD  TN+ +  FI +     + T    ++A + + +  I  ++ILLD  +P     
Sbjct: 9   LVIEDDLVTNQIITAFIHSK-GWGVITCCSLEEASEEIYQQNI--ELILLDYFLPDGSAL 65

Query: 63  VTAKEIRQAFVKHHIPIIFLTVLDDRDSFEKCLALGD-DFILKPVERSVLIAKVQAHYRI 121
              +++R  + +  +P+I ++  ++      C  LG  D+I+KP+   +   KV+     
Sbjct: 66  TLLEKLR--YCESPVPVIVISADNEYQKILSCFRLGALDYIIKPINLELFWHKVEGLLAH 123

Query: 122 VKMHNEVMEQRDELRHFREQVQYDYAISESIFTNLMEEMCH--QVEHIFGIHYISTPSTI 179
             +  +V +QR  L    E++ Y  A  E +  +L E + +   V + F +   +  S  
Sbjct: 124 FSLEKQVKQQRSIL----EKMLYQKAREEQMARHLFEHLVNIGNVTYDF-VKTFTQASAN 178

Query: 180 FNGDLIVVANRPHGGVYVMIADATGHGLPAAISTIPATRTFFSTAQKGLSLGEMVIELNH 239
           F+GD+I+    P+G  +++IAD+TGHGL AA+  +    TF +   KG +L  ++ ELN 
Sbjct: 179 FSGDIILNTVGPNGNFFLIIADSTGHGLSAAMPILRVANTFRAMVAKGFNLVSLIYELNA 238

Query: 240 SLERFLPVGMMLAASVFEVRANGFEISWWGGGLPEAYL-------------LDHHGNIVS 286
           ++    P    +AA V EV     +I  W GG+P+A L             LDH    + 
Sbjct: 239 NVYEDSPGDRFVAAMVLEVDFFKNQIHLWNGGMPDALLYQDEFEGSTGHSELDH----IQ 294

Query: 287 RLISNHMPLGVLPSNEFEADVQHFKLEPNQKLVCYTDGIIEAMNEQGEYFGQERLEHVLT 346
           R  S +M LG+L  + F A++  F +    ++   +DG+IE  ++ G +FG + +  +L+
Sbjct: 295 RYRSKNMALGILSPSSFIANIATFPIPKTGRICLLSDGLIEQQSKGGVFFGMDSVISLLS 354

Query: 347 KAYSEALIPTLYDAVKKFSNRGKGDDLSILTMTFPITNSNSSDKALPKVVLSCI--PLQT 404
             Y   L   L   +K        DD+++  + F + N+   ++   K    C+      
Sbjct: 355 -FYGRDLTEHLKAKLKSIFEHEITDDIAVCVLDFELLNNWYRERE-HKSSQICMKGEFAW 412

Query: 405 ELHFPADVLRKISLMNEVRRFLTGIVSGGEDLDLLCSVLSELFANAIEHGLLELDSSLKE 464
            +     +L  +  +N + +FL            + +V+SEL  NA++HG+L+LDS LK 
Sbjct: 413 AIKMMGSMLLNVDYLNSLNQFLNIFGFSTTFSQRVFTVVSELVTNAVDHGVLKLDSRLKN 472

Query: 465 TPDGFFEFYQLRDKRLKTLPEYHWLILKVNYQPDKQRIEIDLEHSGKGFDCQALKDASNQ 524
            P+ F  ++ +R+  +  L    W+ +++ +      ++I +  SG+G+  +    +++ 
Sbjct: 473 DPESFELYHSIREGSIDKLIASDWVKVELEWHAQLNELKIIVSDSGEGYIPKEQAASTDW 532

Query: 525 -KSYGRGILLATQLCESLEYSNQGRRVTAV 553
            +  GRG+LL   LC+S E    G +   +
Sbjct: 533 FQISGRGLLLVKSLCKSYELVAPGNKTKVI 562