Pairwise Alignments

Query, 556 a.a., DUF342 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  249 bits (635), Expect = 3e-70
 Identities = 155/470 (32%), Positives = 249/470 (52%), Gaps = 11/470 (2%)

Query: 72  IAEVRNATVSVVLGEKEMLASMVVTGAYGGRGLRGNELVHALAQASVLKGINKLALKKVL 131
           IAE R+A +++ L + +M A M +T  +GG+ L   +++ AL    +  G++K+ ++ +L
Sbjct: 76  IAERRDAEIAITLSDDKMSAEMTLTAPWGGKSLTLQDILRALKAEQISMGLSKVKIEALL 135

Query: 132 LVSGQLKPGEVFTQPVARGKEPIQGRDTQFVPLVEDVSKRVLRPQQKAGENKLDMRNLGE 191
                L PGE  ++  A GK  I G +      V    +R+L+PQ++A +  +DMRNLGE
Sbjct: 136 AKLPTLAPGESCSEVFAHGKPAINGTNAIVERKVPLARERLLQPQERA-DGTVDMRNLGE 194

Query: 192 TITVGENDPVMRRLPATKGEMGYTVQGKPIPPKPGKESALVAGKGTHISPNDPNLLLASQ 251
            I V  ND +M ++PAT+G  GY VQG+P+ P  GK+  L AG G  +  +DPN+L+A+ 
Sbjct: 195 IIMVKPNDKLMVKIPATEGTKGYNVQGEPLLPIAGKDLKLTAGTGAELLESDPNVLVATV 254

Query: 252 AGMPLIKKNTIEVDSALCLNHVSVATGHIRFKGNVVIAGDIEPGMIVRATGSITVGGFIE 311
           AG P+  K  ++VD  L +  V +  G++ FKG+V++ GD+  GM+V++TG ITV GF++
Sbjct: 255 AGQPVETKTGMQVDDVLQIKDVDIGYGNVDFKGSVLVTGDVHEGMVVKSTGDITVMGFVD 314

Query: 312 SANVQAQGDIDVGKGIIGHMVTDDEERSCVVKSGGSIRANYAQYVELQAADSIHLGVHSI 371
           SA + A GDI V KG+IG  + +D + S  + + G I A + QY ELQA   I +    +
Sbjct: 315 SAQLIADGDITVSKGVIGRQLKED-QLSTKLSAKGQISAQFVQYSELQAEGDILVTKQLL 373

Query: 372 GNIIRCGNDLTVLDSKMTQGTLSAGNAKVGGKVLCFNLGVEGDTATHVEAFARYQSYKER 431
            +  +    L V D+   +G L  G A+    V    +G    T T V    +    KE 
Sbjct: 374 HSHTQTAGKLIVSDANGRRGDLVGGVAQADKGVKAVIIGATAGTRTEVFCAMKCGELKEE 433

Query: 432 INKHKELYKQAQDTTMALIRREIEFKK-RPKAERSD-----EEAQEIETAKADASTQMEK 485
           +   K+L    +   +A +  E    K  PKAE  D     E+ + +   K   + +  +
Sbjct: 434 L---KQLDHGIKHMVVAKLNIEASLNKLPPKAEWQDDALMVEQVKGMLEEKRRITEEWSR 490

Query: 486 IKLALDMLNEEFEQQLLENTVEAKNKVFTHVTIQFGDEKVLTKREHGASI 535
            +   + + +E E    E  +EA   +F +V +  G     T+REHG  I
Sbjct: 491 EEQEFNAIKQEVENYYQEYRIEACKHIFANVELHIGPAFNRTQREHGPCI 540