Pairwise Alignments

Query, 556 a.a., DUF342 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon from Dechlorosoma suillum PS

 Score =  159 bits (403), Expect = 2e-43
 Identities = 122/435 (28%), Positives = 206/435 (47%), Gaps = 23/435 (5%)

Query: 37  LAQIGAGKLFILDEEVTRFINCVKESKRAAFEGIVIAEVRNATVSVVLGEKEMLASMVVT 96
           +A++G G L      +    + +K ++  A   + +AE  +A   V +   +M A + +T
Sbjct: 41  IAELGHGALRRNAAALGVLADSIKGARPVA--ALAVAEAVDAKAEVSVAGDKMAAFLSIT 98

Query: 97  GAYGGRGLRGNELVHALAQASVLKGINKLALKKVLLVSGQLKPGEVFTQPVARGKEPIQG 156
              GG  +    +  ALAQ  V  GI + A+ + L +      G+     +A G+ P+ G
Sbjct: 99  PPQGGAPIDDAAIRRALAQQGVTTGIRESAIAQALAL------GQADNLLIAEGRAPVHG 152

Query: 157 RDTQFVPLVEDVSKRVLRPQQKAGENKLDMRNLGETITVGENDPVMRRLPATKGEMGYTV 216
            D +   LV +   RV +  +K     +D RNLGE +TV     VM+R+PAT G  G TV
Sbjct: 153 EDGRIEVLVPESRSRVPQVNEKG---LMDYRNLGEILTVHAGQAVMQRIPATPGTPGETV 209

Query: 217 QGKPIPPKPGKESALVAG-KGTHISPNDPNLLLASQAGMPLIKKNTIEVDSALCLNHVSV 275
            G  IP   GKE+       G    P DPN L A+  G P+  +  + V+    +N V++
Sbjct: 210 SGAVIPALAGKETMFSPNLSGVAPDPADPNKLAAAITGQPVRTREGVIVEPTYTVNEVTI 269

Query: 276 ATGHIRFKGNVVIAGDIEPGMIVRATGSITVGGFIESANVQAQGDIDVGKGIIGHMVTDD 335
            +G+I F G V + GD++ GM +RA+G I +GG +E+A + A GDI +  G IG     D
Sbjct: 270 NSGNIDFDGAVTVKGDVQAGMTIRASGDIEIGGTVEAAVIVAGGDIVIKGGAIGAGGRKD 329

Query: 336 ---EERSCVVKSGGSIRANYAQYVELQAADSIHLGVHSIGNIIRCGNDLTVLDSKMTQGT 392
               E    ++ GGS  A Y Q  +++A DSI +   ++ + +   N + V      +G 
Sbjct: 330 AQGNEIPSYIQCGGSFTATYVQQAKVEAGDSIFIDDVAMQSNLIAINQIVV--GHKQRGH 387

Query: 393 LSAGNAK----VGGKVLCFNLGVEGDTATHVEAFARYQSYKERINKHKELYKQAQDTTMA 448
           +  G A+    V  KV+    G    T   +    + ++ ++R+  H++  ++     + 
Sbjct: 388 IIGGRAQATLLVKAKVI--GSGAHIGTRIDIGLDPKLRAQQQRLVLHRQQVEEQLAQVVK 445

Query: 449 LIRREIEFKKRPKAE 463
           L+    +  +R   E
Sbjct: 446 LLELAAKLPERVPPE 460