Pairwise Alignments

Query, 556 a.a., DUF342 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 56.6 bits (135), Expect = 2e-12
 Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 18/224 (8%)

Query: 173 LRPQQKAGENKLDMRNLGETITVGENDPVMRRLPATKGEMGYTVQGKPIPPKPG--KESA 230
           L+P    G+ K+D  NLG    V +   +   +P    +        P+  +    +E  
Sbjct: 18  LKPGLAVGKGKVDHYNLGYVQNVVKGQVLAEFIPIDDTD-------DPVIDRNHIFEEPL 70

Query: 231 LVAGKGTHISPNDPNLLLASQAGMPLIKKNTIEVDSALCLNH-VSVATGHIRFKGNVVIA 289
           L  G    + P+ P  ++A   G        I V   L +   V   TG+I F  ++ + 
Sbjct: 71  LPVGPNCKVDPDSPLRVVADANGYVFYNDGLITVKRMLNVRRDVDFHTGNIFFVSDIAVH 130

Query: 290 GDIEPGMIVRATGSITVGGFIESANVQAQGDIDVGKGIIGHMVTDDEERSCVVKSGGSIR 349
           GD+  G  V+   +I V G IE A V+A+G + V  G  G         S ++ +G ++R
Sbjct: 131 GDVRAGFEVQG-NNILVKGIIEGATVRARGSLAVEGGARG------SGGSGLLDAGDTLR 183

Query: 350 ANYAQYVELQAADSIHLGVHSIGNIIRCGNDLTVLDSKMTQGTL 393
             +A+ +EL+A  +I +    + +++    +L V+ +++  GT+
Sbjct: 184 VPFAESMELRAHGNILIEKFCLHSLVYAATNL-VVKNRLQGGTV 226