Pairwise Alignments

Query, 556 a.a., DUF342 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  249 bits (636), Expect = 2e-70
 Identities = 172/548 (31%), Positives = 280/548 (51%), Gaps = 17/548 (3%)

Query: 4   EILELTPDRQKVIAKLGAQGAAKELNRSELPMVLAQIGAGKLFILDEEVTRFI---NCVK 60
           E+LEL+ D+ K   +L        + R ++  +L+      LF L+  + + I   N + 
Sbjct: 5   ELLELSSDKTKAELRL-IPNEHGPITRDDVMRLLSVPEFATLFPLEPAIDKVIAQTNSLC 63

Query: 61  ESKRAAFEGI-VIAEVRNATVSVVLGEKEMLASMVVTGAYGGRGLRGNELVHALAQASVL 119
             +   +E   V+AE R+ +V + L + +M A+M++T  +GG+ +   E++  L + +V 
Sbjct: 64  HQEDGKYELFAVLAERRDGSVKIELSQDKMQATMILTAPWGGKAVDLPEILTQLKKDNVC 123

Query: 120 KGINKLALKKVLLVSGQLKPGEVFTQPVARGKEPIQGRDTQFVPLVEDVSKRVLRPQQKA 179
            G++KL ++ +L    +LKPGE     +A+GK  I G++      V    +R+L+PQ++ 
Sbjct: 124 MGLSKLKIQTLLQKMTKLKPGESCQSEIAQGKAAINGQNAVLERKVSIARERLLQPQERE 183

Query: 180 GENKLDMRNLGETITVGENDPVMRRLPATKGEMGYTVQGKPIPPKPGKESALVAGKGTHI 239
            +  +DMRNLG  I V  ND +M + PAT+G  GY ++G+ +  KPGK+  L  G GT  
Sbjct: 184 -DGTVDMRNLGAMIMVKPNDLLMIKHPATEGSPGYNIKGEVLKQKPGKDLVLQPGTGTDF 242

Query: 240 SPNDPNLLLASQAGMPLIKKNTIEVDSALCLNHVSVATGHIRFKGNVVIAGDIEPGMIVR 299
            P DPN L+A+ AG P+  +  + VD  L L  V ++TGHI FKG+++I GD+  GM+V+
Sbjct: 243 HPKDPNKLIATVAGQPVETRTGMNVDDVLQLKDVDISTGHINFKGSILITGDVHEGMMVK 302

Query: 300 ATGSITVGGFIESANVQAQGDIDVGKGIIGHMVTDDEERSCVVKSGGSIRANYAQYVELQ 359
           ++G ITV GF++SA ++A GDI V KG+IG  V  + E S  + + G I A + QY +L 
Sbjct: 303 SSGDITVMGFVDSATLEADGDITVSKGVIGRQVRVN-EFSTNITAQGQISAQFVQYSQLT 361

Query: 360 AADSIHLGVHSIGNIIRCGNDLTVLDSKMTQGTLSAGNAKVGGKVLCFNLGVEGDTATHV 419
           A  +I +    + +  +    LTV D    +G L  G       +    +G    T T V
Sbjct: 362 AKGNILITKQLLHSNTKTAGTLTVSDQSGRRGDLVGGVVHAEKGLTAVVIGATAGTKTEV 421

Query: 420 EAFARYQSYKERINKHKELYKQAQDTTMALIRREIEFKK-RPKAE-RSD----EEAQEIE 473
                    K+ +   K+L +      +A +  E   KK  PK+E +SD    E+ + + 
Sbjct: 422 YCAMEQGELKQNL---KQLEESVHAMVVATLDIEARLKKLPPKSEWQSDPIMIEQIKMML 478

Query: 474 TAKADASTQMEKIKLALDMLNEEFEQQLLENTVEAKNKVFTHVTIQFGDEKVLTKREHG- 532
             K     +  + +L  D L +E E    +  ++    VF +     G     T REHG 
Sbjct: 479 DEKNRILAERSREELEFDSLKQEVETYYDKYRIDVIKHVFLNAEFHIGQANHRTTREHGT 538

Query: 533 ASIFKFNQ 540
            SI   NQ
Sbjct: 539 CSITNLNQ 546