Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 719 a.a., ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing from Pseudomonas fluorescens FW300-N2E2

 Score =  536 bits (1382), Expect = e-156
 Identities = 287/699 (41%), Positives = 443/699 (63%), Gaps = 4/699 (0%)

Query: 3   DTLLNSLVYVSRYYGLANSPEALINGLPLADGKLTPFLFPRSAERAGLIAKENRAPLDQI 62
           D LL+ L+ + + +G   S  +L  GLP+A  +L+  L PR+A RA L A+  R  L  I
Sbjct: 19  DPLLDGLLILCKLHGATVSRASLSAGLPMAHQRLSLDLLPRAAARASLQARLLRRELADI 78

Query: 63  PHLVFPVVLLLKGGEACVLNSINQETQEAEIVTAESGLVPVAYSLSDLEAMYIGRYFMVK 122
             L  PV+L+L GG   VL    ++ + A I+ +E+       S  +L   Y G+    +
Sbjct: 79  SPLNLPVMLILAGGRCAVLRRWGEDGK-ALILPSEADGGEQWVSREELTTDYSGQALFAR 137

Query: 123 KQFRFDE-RSPEVLKPRDGHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYDK 181
            +   ++ R+P  L PR   WF  T+  S+ +Y D ++AS LINL  +  P+F    YD+
Sbjct: 138 PRHELEDLRAP--LVPRVEAWFRDTLKLSRWLYSDAILASFLINLLGLMVPLFVMQTYDR 195

Query: 182 VVPNLAFETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRME 241
           VVPN A  TLWVL+ G+L+   F+ V +++R++ +D AGKK+D+++S+ LF ++ G+ M+
Sbjct: 196 VVPNQATSTLWVLAVGLLIGTGFELVLRVVRAHLLDTAGKKTDVILSATLFERITGMAMK 255

Query: 242 ARPPSVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVL 301
           A+P ++G FA+ + +F+ +REF T+ T++SLIDLPFALL LV+I L+ G LV +PV+   
Sbjct: 256 AKPVTIGGFAQSIHDFQGLREFLTAVTLTSLIDLPFALLMLVVIGLLGGWLVVIPVVAFP 315

Query: 302 ILVIYSFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAH 361
           I ++++ +IQ RL+  +++   L +Q+ A LIE+L GLET+K   A+ + Q++WE     
Sbjct: 316 ITIVFAMIIQVRLRDTVQKSLALGAQRQALLIETLGGLETLKACSAESERQHQWESTHGA 375

Query: 362 MANWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIG 421
           +   +  +R ++    N   F+QQ A +  I+ GVY I  G+L++G L+A  ML  R + 
Sbjct: 376 LTRLDSHARNLSALATNGTLFLQQLAGMATIVAGVYSIIAGNLSVGALVATYMLGSRVLA 435

Query: 422 PLVQLSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPNS 481
           PL Q++ L TRY QA+ +M   + +M++P E++  +R + R  +QG +++  VTFHY   
Sbjct: 436 PLGQIAGLITRYQQAQLTMRSTDALMALPQERDAKQRPLDRTQLQGALDVSGVTFHYNGQ 495

Query: 482 PIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHID 541
              ++ ++S ++ PGE+V IIGR GSGK+TL RL+MG Y P EG + +D  D+ QL   D
Sbjct: 496 SSPALANISFSLKPGERVGIIGRSGSGKSTLARLVMGFYAPEEGQLLLDGLDLRQLDVAD 555

Query: 542 IRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVG 601
           +R+ IG V  D  L  GS+RDN+TLG     D  +++ A   GVT   +Q P G +R VG
Sbjct: 556 LRQQIGYVAHDLPLLAGSLRDNLTLGARYISDARMLEVAELTGVTELARQHPQGFDRPVG 615

Query: 602 EGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILI 661
           E G LLSGGQRQ+V +ARA L  PP+LL+DEPTSAMDN SE  ++Q+L      +T++L+
Sbjct: 616 ERGQLLSGGQRQAVLLARALLLDPPILLLDEPTSAMDNSSEDVLRQKLHTHVQGKTVLLV 675

Query: 662 THKTSMLDVVDRVIVMEKGCIIADGPKHEVLNDLRQGNV 700
           TH+TSML +VDR++V++ G I+ADGPK  V++ LR+G V
Sbjct: 676 THRTSMLSLVDRLVVLDNGRIVADGPKEAVIDALRKGRV 714