Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., ABC-type protease exporter, ATP-binding component PrtD/AprD from Pseudomonas fluorescens FW300-N2E2

 Score =  233 bits (594), Expect = 2e-65
 Identities = 156/560 (27%), Positives = 298/560 (53%), Gaps = 24/560 (4%)

Query: 147 IYKSKHIYRDVLIA----SLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGILVIF 202
           ++K+   Y+++LI+    + LIN+  +A  ++   VYD+ + +    TL +LS  ++  F
Sbjct: 12  LFKALGDYKNILISVGCFTALINVLMLAPSIYMLQVYDRGLSSQNETTLAMLSLMVVGFF 71

Query: 203 LFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRMEARPPSVGAFARHLQEFESIRE 262
           +F  + +M+RS+ +   G + +   + +++       +     + G   + L +   IR+
Sbjct: 72  VFIGLLEMVRSFVVIRIGSQLERRFNLQVYKAAFERNLRQGEGNAG---QSLGDLTHIRQ 128

Query: 263 FFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPV---IGVLILVIYSFLIQSRLKRAIE 319
           F T   + +  D P+  ++L++I+L     VW+ V   +G L+L+  + L ++  K+A+ 
Sbjct: 129 FLTGPALFAFFDAPWFPIYLLVIYLFN---VWLGVFASVGTLLLIGLACLNEAMTKKALG 185

Query: 320 EGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRW---EEAVAHMANWNIKSRRITDSI 376
           + S  + Q        L   ET++  G  G  + RW         + N    +  +  S+
Sbjct: 186 QASVYSQQSSQLATSHLHNAETIQAMGMLGALRSRWFAVHSRFLGLQNQASDTGAVISSL 245

Query: 377 QNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQA 436
             T     Q+  +G+   G  L+  GD+T G +IA ++L GR + P+ QL  +  +++ A
Sbjct: 246 SKTLRLCLQSLVLGL---GALLVIKGDMTAGMMIAGSILMGRVLSPIDQLIAVWKQWSGA 302

Query: 437 KSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPNSPIASVRDLSLTIHPG 496
           K +   ++ ++     Q++G      P  +G++  + V+   P    A+++ +S ++  G
Sbjct: 303 KLAYRRLDALLQAFAPQDDGMTL---PAPEGQVSFEHVSAGPPGQRNATLQQVSFSLAAG 359

Query: 497 EKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLF 556
           E + ++G  GSGK+TL R+++G++    G VR+D  DI + +   +  +IG +PQD  LF
Sbjct: 360 EVLGVLGASGSGKSTLARVLVGVWPTLAGTVRLDGADIHRWNREQLGPHIGYLPQDIELF 419

Query: 557 YGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVS 616
            GSI +NI   R  +D ++V+ AA +AGV     + P G +  +GE G  LSGGQ+Q V+
Sbjct: 420 CGSIAENIARFRQ-ADPQKVVAAAQQAGVHELILRLPQGYDTVLGEDGGGLSGGQKQRVA 478

Query: 617 IARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSET-LILITHKTSMLDVVDRVI 675
           +ARA   RP ++++DEP S +D   E  +   ++Q+K   T ++L+TH++S L   D+++
Sbjct: 479 LARAMYDRPSLVVLDEPNSNLDTVGEAALASAIAQMKAQGTSVVLVTHRSSALAQADKLL 538

Query: 676 VMEKGCIIADGPKHEVLNDL 695
           V+++G + A GP  +VL  L
Sbjct: 539 VLDEGRLQAFGPSQQVLRAL 558